Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1069 and Atu1070 are separated by 3 nucleotidesAtu1070 and Atu1071 overlap by 1 nucleotidesAtu1071 and Atu1072 overlap by 4 nucleotidesAtu1072 and Atu1073 are separated by 258 nucleotides Atu1069: Atu1069 - proline iminopeptidase, at 1,061,975 to 1,062,931 Atu1069 Atu1070: Atu1070 - hypothetical protein, at 1,062,935 to 1,063,393 Atu1070 Atu1071: Atu1071 - hypothetical protein, at 1,063,393 to 1,063,866 Atu1071 Atu1072: Atu1072 - hypothetical protein, at 1,063,863 to 1,064,231 Atu1072 Atu1073: Atu1073 - cysteinyl-tRNA synthetase, at 1,064,490 to 1,065,875 Atu1073
Group Condition Atu1069 Atu1070 Atu1071 Atu1072 Atu1073
phage AgroPhage_D04 -0.5 -0.5 -0.3 -0.0 N.D.
stress Erythromycin 12.5 ug/mL -0.1 +0.1 -0.3 -0.9 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.3 -0.3 +0.4 N.D.
r2a control R2A control -0.1 -0.3 -0.4 -0.4 N.D.
phage AgroPhage_B01 -0.3 -0.2 -0.4 -0.3 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.0 -0.6 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.4 +0.1 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.6 +0.3 -0.5 N.D.
carbon source D-Saccharic potassium salt (C) -0.5 +0.3 -0.4 -0.2 N.D.
phage AgroPhage_C10 -0.1 +0.2 -0.4 -0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 -0.3 +0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.5 -0.2 -0.2 N.D.
carbon source D-Raffinose (C) -0.3 +0.2 +0.2 -0.5 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.3 +0.2 -0.4 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.3 -0.8 N.D.
Atjh2 +0.1 +0.3 +0.1 -0.7 N.D.
nophagecontrol No phage control +0.3 -0.5 -0.2 +0.2 N.D.
phage AgroPhage_C04 -0.5 +0.2 -0.1 +0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.4 +0.1 -0.6 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.7 -0.7 -0.2 N.D.
stress R2A with sodium iodate 30 mM +0.2 +0.2 +0.2 -0.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 -0.2 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 -0.3 +0.1 +0.8 N.D.
stress Chloramphenicol 12.5 ug/mL -0.3 +0.4 -0.2 +0.5 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.3 +0.2 -0.2 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 +0.3 +0.1 +0.7 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.1 +0.3 +0.7 N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.6 +0.2 +0.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.2 +0.5 -0.1 +0.7 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 +0.2 +0.5 N.D.
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