Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1067 and Atu1068 are separated by 36 nucleotidesAtu1068 and Atu1069 are separated by 226 nucleotidesAtu1069 and Atu1070 are separated by 3 nucleotidesAtu1070 and Atu1071 overlap by 1 nucleotides Atu1067: Atu1067 - penicillin-binding protein, at 1,059,043 to 1,060,803 Atu1067 Atu1068: Atu1068 - hypothetical protein, at 1,060,840 to 1,061,748 Atu1068 Atu1069: Atu1069 - proline iminopeptidase, at 1,061,975 to 1,062,931 Atu1069 Atu1070: Atu1070 - hypothetical protein, at 1,062,935 to 1,063,393 Atu1070 Atu1071: Atu1071 - hypothetical protein, at 1,063,393 to 1,063,866 Atu1071
Group Condition Atu1067 Atu1068 Atu1069 Atu1070 Atu1071
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -1.0 -0.3 -0.3
phage AgroPhage_D04 -0.0 -0.4 -0.5 -0.5 -0.3
stress R2A with Vancomycin 0.009 mM -0.5 -0.8 -0.1 -0.1 -0.1
phage AgroPhage_B07 -0.1 -0.5 +0.0 -0.3 -0.5
phage AgroPhage_F10 -0.2 -0.6 -0.1 -0.4 -0.2
phage AgroPhage_C10 -0.4 -0.6 -0.1 +0.3 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.8 +0.0 -0.2 -0.3
phage AgroPhage_C04 -0.3 -0.2 -0.5 +0.1 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 -0.4 -0.4 -0.3
carbon source D-Saccharic potassium salt (C) +0.1 -0.5 +0.0 -0.5 +0.1
phage AgroPhage_A05 +0.0 -0.6 -0.1 +0.4 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 -0.6 +0.5 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.4 -0.0 -0.1 -0.4
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.2 -0.1 -0.5 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.2 -0.2 -0.6 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 -0.3 -0.1 -0.3 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 -0.2 +0.3 +0.3
phage AgroPhage_E04 +0.1 +0.6 -0.2 -0.5 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.0 +0.3 +0.7 -0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 -0.0 +0.5 +0.1
stress R2A with Strontium chloride 750 mM +0.2 +0.4 -0.2 -0.2 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 -0.1 +0.4 -0.2
carbon source methyl-alpha-D-xylopyranoside (C) +0.0 +0.4 +0.2 -0.3 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 +0.0 -0.1 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.9 +0.2 +0.1 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +0.2 +0.5 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.5 +0.4 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.7 +0.4 +0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 -0.1 +0.4 +0.4 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.7 -0.1 +0.2 +0.6
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