Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu8147 and Atu1066 are separated by 141 nucleotidesAtu1066 and Atu1067 are separated by 262 nucleotidesAtu1067 and Atu1068 are separated by 36 nucleotidesAtu1068 and Atu1069 are separated by 226 nucleotides Atu8147: Atu8147 - hypothetical protein, at 1,055,979 to 1,058,003 Atu8147 Atu1066: Atu1066 - hypothetical protein, at 1,058,145 to 1,058,780 Atu1066 Atu1067: Atu1067 - penicillin-binding protein, at 1,059,043 to 1,060,803 Atu1067 Atu1068: Atu1068 - hypothetical protein, at 1,060,840 to 1,061,748 Atu1068 Atu1069: Atu1069 - proline iminopeptidase, at 1,061,975 to 1,062,931 Atu1069
Group Condition Atu8147 Atu1066 Atu1067 Atu1068 Atu1069
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -1.9 -0.1 -0.2 -1.0
stress R2A with m-arsenite 0.8 mM -1.7 -0.2 +0.1 -0.0 -0.2
phage AgroPhage_D04 -0.7 -0.3 -0.0 -0.4 -0.5
stress R2A with Vancomycin 0.009 mM -0.7 +0.2 -0.5 -0.8 -0.1
phage AgroPhage_B07 -0.6 -0.6 -0.1 -0.5 +0.0
phage AgroPhage_F10 -0.4 -0.5 -0.2 -0.6 -0.1
stress Dodecyl Sulfate 0.2 mM -1.2 +0.1 -0.2 -0.1 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 +0.1 -0.4 -0.6
phage AgroPhage_F04 -0.8 +0.3 -0.0 -0.3 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.5 -0.3 +0.5 -0.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.7 -0.2 +0.1 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 -0.9 -0.2 +0.3 -0.2
stress R2A with Tetracycline 0.002 mM -0.7 +0.5 -0.3 -0.5 +0.2
phage AgroPhage_C04 +0.0 +0.5 -0.3 -0.2 -0.5
stress R2A with m-arsenite 0.8 mM -1.2 +0.3 +0.1 +0.3 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.6 +0.0 -0.8 +0.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.4 -0.1 +0.8 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.6 -0.4 -0.3 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.6 +0.2 +0.5 -0.1
nophagecontrol No phage control +0.1 -0.8 +0.5 +0.1 -0.0
phage AgroPhage_E04 -0.9 +0.3 +0.1 +0.6 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.5 -0.1 +0.3 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -0.7 -0.0 +0.5 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.8 +0.1 +0.9 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.5 +0.0 +0.7 +0.4
phage AgroPhage_E10 -0.8 +0.2 +0.0 +0.8 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 -0.5 +0.7 -0.1 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 +0.5 +0.4 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.6 +0.3 -0.2 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.3 +0.5 +0.7 -0.1
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