Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1064 and Atu8147 are separated by 111 nucleotidesAtu8147 and Atu1066 are separated by 141 nucleotidesAtu1066 and Atu1067 are separated by 262 nucleotidesAtu1067 and Atu1068 are separated by 36 nucleotides Atu1064: Atu1064 - ABC transporter, nucleotide binding/ATPase protein, at 1,053,981 to 1,055,867 Atu1064 Atu8147: Atu8147 - hypothetical protein, at 1,055,979 to 1,058,003 Atu8147 Atu1066: Atu1066 - hypothetical protein, at 1,058,145 to 1,058,780 Atu1066 Atu1067: Atu1067 - penicillin-binding protein, at 1,059,043 to 1,060,803 Atu1067 Atu1068: Atu1068 - hypothetical protein, at 1,060,840 to 1,061,748 Atu1068
Group Condition Atu1064 Atu8147 Atu1066 Atu1067 Atu1068
stress R2A with m-arsenite 0.8 mM -2.0 -1.7 -0.2 +0.1 -0.0
stress R2A with m-arsenite 0.8 mM -1.7 -1.2 +0.3 +0.1 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -1.9 -0.1 -0.2
stress R2A with Vancomycin 0.009 mM -0.3 -0.7 +0.2 -0.5 -0.8
phage AgroPhage_B07 +0.2 -0.6 -0.6 -0.1 -0.5
phage AgroPhage_F10 +0.2 -0.4 -0.5 -0.2 -0.6
stress Dodecyl Sulfate 0.2 mM +0.1 -1.2 +0.1 -0.2 -0.1
phage AgroPhage_C10 +0.3 -0.2 -0.1 -0.4 -0.6
phage AgroPhage_D04 +0.3 -0.7 -0.3 -0.0 -0.4
phage AgroPhage_H04 +0.3 -0.7 -0.5 -0.1 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.4 -0.7 -0.2 +0.1
stress R2A with Tetracycline 0.002 mM +0.0 -0.7 +0.5 -0.3 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 +0.6 +0.0 -0.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 +0.1 -0.9 -0.2 +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.7 -0.4 -0.1 +0.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.3 -0.9 +0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -0.1 -0.5 +0.7 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 -0.5 -0.3 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.2 -0.1 -0.2 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 -0.5 +0.0 +0.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.8 +0.1 +0.9
nophagecontrol No phage control +0.0 +0.1 -0.8 +0.5 +0.1
phage AgroPhage_E10 -0.1 -0.8 +0.2 +0.0 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.3 -0.7 -0.0 +0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 -0.5 -0.1 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.6 +0.2 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.4 +0.2 +0.5 +0.4
phage AgroPhage_E04 +0.6 -0.9 +0.3 +0.1 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.6 +0.3 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.0 +0.3 +0.5 +0.7
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