Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1048 and Atu1049 are separated by 51 nucleotidesAtu1049 and Atu1050 are separated by 177 nucleotidesAtu1050 and Atu1051 are separated by 77 nucleotidesAtu1051 and Atu1052 overlap by 4 nucleotides Atu1048: Atu1048 - ABC transporter, membrane spanning protein, at 1,042,121 to 1,042,939 Atu1048 Atu1049: Atu1049 - hypothetical protein, at 1,042,991 to 1,043,674 Atu1049 Atu1050: Atu1050 - hypothetical protein, at 1,043,852 to 1,044,673 Atu1050 Atu1051: Atu1051 - hypothetical protein, at 1,044,751 to 1,045,269 Atu1051 Atu1052: Atu1052 - hypothetical protein, at 1,045,266 to 1,045,853 Atu1052
Group Condition Atu1048 Atu1049 Atu1050 Atu1051 Atu1052
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.3 -0.2 N.D. -0.9
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.4 -0.2 N.D. -1.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -0.0 N.D. -1.8
Atjh15 -0.2 -0.2 +0.2 N.D. -1.6
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.0 -0.4 N.D. -0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.2 -0.1 -0.3 N.D. -1.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.2 -0.2 N.D. -1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.1 -0.1 N.D. -1.3
in planta Bethi_Library_OD0.1 -0.3 -0.2 -0.2 N.D. -0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.0 -0.2 N.D. -0.5
Atjh2 +0.0 +0.2 -0.2 N.D. -1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 -0.3 N.D. -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 -0.4 -0.3 N.D. -0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 +0.1 +0.3 N.D. -1.3
Atjh10 +0.3 -0.3 -0.0 N.D. -1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.5 -0.3 N.D. -1.1
phage AgroPhage_B01 +0.0 +0.4 -0.1 N.D. -1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -0.4 +0.1 N.D. +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.4 -0.3 N.D. -0.9
Atjh2 -0.1 +0.4 -0.2 N.D. -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.5 -0.3 N.D. -0.7
stress R2A with Phosphomycin 50 mM -0.4 -0.3 -0.2 N.D. +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.8 +0.1 +0.2 N.D. +0.3
nitrogen source DL-2-Aminobutyric (N) -0.4 +0.5 +0.5 N.D. -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.6 +0.1 +0.2 N.D. +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.5 -0.6 N.D. +0.4
phage AgroPhage_D07 -0.3 +0.5 +0.0 N.D. +0.5
phage AgroPhage_E04 -0.5 +0.7 +0.1 N.D. +0.5
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 +0.3 -0.2 N.D. +0.6
phage AgroPhage_F10 -0.1 +0.3 -0.2 N.D. +1.4
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