Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1047 and Atu1048 overlap by 4 nucleotidesAtu1048 and Atu1049 are separated by 51 nucleotidesAtu1049 and Atu1050 are separated by 177 nucleotidesAtu1050 and Atu1051 are separated by 77 nucleotides Atu1047: Atu1047 - ABC transporter, nucleotide binding/ATPase protein, at 1,041,369 to 1,042,124 Atu1047 Atu1048: Atu1048 - ABC transporter, membrane spanning protein, at 1,042,121 to 1,042,939 Atu1048 Atu1049: Atu1049 - hypothetical protein, at 1,042,991 to 1,043,674 Atu1049 Atu1050: Atu1050 - hypothetical protein, at 1,043,852 to 1,044,673 Atu1050 Atu1051: Atu1051 - hypothetical protein, at 1,044,751 to 1,045,269 Atu1051
Group Condition Atu1047 Atu1048 Atu1049 Atu1050 Atu1051
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.6 -0.3 -0.3 N.D.
stress R2A with Phosphomycin 50 mM -0.1 -0.4 -0.3 -0.2 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 -0.3 -0.4 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.8 -0.0 -0.2 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.1 -0.8 -0.1 +0.0 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.8 -0.4 +0.1 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.6 +0.4 -0.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.2 +0.2 -0.8 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.4 -0.4 -0.3 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.7 +0.0 -0.2 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -0.5 +0.1 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 -0.6 -0.0 +0.1 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 -0.7 +0.2 +0.2 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 -0.7 +0.2 +0.2 N.D.
phage AgroPhage_H04 +0.5 -0.5 +0.2 -0.1 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 -0.5 +0.0 +0.3 N.D.
phage AgroPhage_F04 +0.4 -0.5 +0.0 +0.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.2 +0.5 -0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 +0.4 -0.1 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.0 +0.5 -0.6 N.D.
phage AgroPhage_E04 -0.1 -0.5 +0.7 +0.1 N.D.
nophagecontrol No phage control +0.2 -0.4 +0.2 +0.3 N.D.
nitrogen source DL-2-Aminobutyric (N) -0.2 -0.4 +0.5 +0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.3 +0.6 -0.1 N.D.
phage AgroPhage_D07 +0.4 -0.3 +0.5 +0.0 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.4 +0.0 -0.3 N.D.
no phage P5L5 +0.2 +0.4 -0.2 +0.3 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.2 +0.2 +0.5 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.3 +0.4 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.3 +0.4 +0.1 +0.2 N.D.
remove
Atu1047
plot		 remove
Atu1048
plot		 remove
Atu1049		 remove
Atu1050
plot		 remove
Atu1051
plot