Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1035 and Atu1036 are separated by 83 nucleotidesAtu1036 and Atu1037 are separated by 148 nucleotidesAtu1037 and Atu1038 are separated by 135 nucleotidesAtu1038 and Atu1039 are separated by 56 nucleotides Atu1035: Atu1035 - ribonuclease III, at 1,027,435 to 1,028,154 Atu1035 Atu1036: Atu1036 - GTP-binding protein, Era family, at 1,028,238 to 1,029,179 Atu1036 Atu1037: Atu1037 - nitrogen fixation regulatory protein, at 1,029,328 to 1,030,080 Atu1037 Atu1038: Atu1038 - two component response regulator, at 1,030,216 to 1,030,593 Atu1038 Atu1039: Atu1039 - DNA repair protein RecO, at 1,030,650 to 1,031,414 Atu1039
Group Condition Atu1035 Atu1036 Atu1037 Atu1038 Atu1039
stress R2A with Cisplatin 0.0016 mM N.D. N.D. +0.1 +0.0 -5.2
stress R2A with Nitrofurantoin 0.4 mg/mL N.D. N.D. -0.2 -0.0 -3.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. -0.1 +0.2 -3.7
stress R2A with Cisplatin 0.0016 mM N.D. N.D. -0.0 -0.0 -3.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.3 -0.2 -3.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.2 +0.5 -3.7
stress R2A with Nitrofurantoin 0.4 mg/mL N.D. N.D. -0.0 -0.1 -2.7
phage AgroPhage_E10 N.D. N.D. -0.4 +0.4 -2.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.1 +0.4 -2.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. +0.0 +0.4 -2.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. -0.0 +0.1 -2.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. +0.0 +0.2 -2.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.1 -0.7 -1.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. +0.0 +0.4 -2.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. +0.2 +0.0 -2.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.5 +0.3 -1.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.3 -1.2 -0.8
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.2 -1.4 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.3 +0.6 -1.6
lb_sorghum_leaf LB_sorghum_leaf N.D. N.D. +0.0 +0.4 -1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.5 +1.0 -2.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. +0.3 +0.4 -1.8
Atjh15 N.D. N.D. -0.2 +0.9 -1.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.0 +1.0 -1.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.0 +1.0 -1.6
phage AgroPhage_E04 N.D. N.D. +0.3 +0.6 -1.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.3 +1.1 -1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.2 +1.0 -1.0
stress R2A with tungstate 375 mM N.D. N.D. +0.4 -0.4 +1.5
stress R2A with tungstate 375 mM N.D. N.D. +0.1 -0.1 +2.1
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