Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1034 and Atu1035 overlap by 4 nucleotidesAtu1035 and Atu1036 are separated by 83 nucleotidesAtu1036 and Atu1037 are separated by 148 nucleotidesAtu1037 and Atu1038 are separated by 135 nucleotides Atu1034: Atu1034 - prokaryotic type I signal peptidase, at 1,026,692 to 1,027,438 Atu1034 Atu1035: Atu1035 - ribonuclease III, at 1,027,435 to 1,028,154 Atu1035 Atu1036: Atu1036 - GTP-binding protein, Era family, at 1,028,238 to 1,029,179 Atu1036 Atu1037: Atu1037 - nitrogen fixation regulatory protein, at 1,029,328 to 1,030,080 Atu1037 Atu1038: Atu1038 - two component response regulator, at 1,030,216 to 1,030,593 Atu1038
Group Condition Atu1034 Atu1035 Atu1036 Atu1037 Atu1038
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.2 -1.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.0 -1.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. -0.2 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.2 -1.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. -0.5 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. +0.0 -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.3 -1.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.2 -0.7
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.2 -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. N.D. N.D. +0.1 -0.9
no phage P4L5 N.D. N.D. N.D. +0.2 -0.9
stress R2A with Lithium chloride 900 mM N.D. N.D. N.D. +0.1 -0.7
stress R2A with Vancomycin 0.009 mM N.D. N.D. N.D. +0.2 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. N.D. N.D. +0.4 -0.7
phage AgroPhage_E10 N.D. N.D. N.D. -0.4 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.5 -0.4
carbon source D-Saccharic potassium salt (C) N.D. N.D. N.D. -0.3 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.3 +0.6
phage AgroPhage_C04 N.D. N.D. N.D. -0.3 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.2 +0.8
phage phage 95.1 N.D. N.D. N.D. -0.3 +0.8
lb LB N.D. N.D. N.D. -0.1 +0.7
phage AgroPhage_D07 N.D. N.D. N.D. -0.2 +0.8
phage AgroPhage_E04 N.D. N.D. N.D. +0.3 +0.6
phage AgroPhage_D10 N.D. N.D. N.D. +0.5 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. -0.1 +0.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.0 +1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.2 +1.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.3 +1.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. +0.5 +1.0
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