Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1030 and Atu1031 are separated by 157 nucleotidesAtu1031 and Atu1032 are separated by 267 nucleotidesAtu1032 and Atu1033 overlap by 4 nucleotidesAtu1033 and Atu1034 are separated by 206 nucleotides Atu1030: Atu1030 - GTP pyrophosphohydrolase/synthetase, RelA/SpoT family, at 1,022,661 to 1,024,895 Atu1030 Atu1031: Atu1031 - hypothetical protein, at 1,025,053 to 1,025,238 Atu1031 Atu1032: Atu1032 - hypothetical protein, at 1,025,506 to 1,026,084 Atu1032 Atu1033: Atu1033 - holo-(acyl-carrier Protein) synthase, at 1,026,081 to 1,026,485 Atu1033 Atu1034: Atu1034 - prokaryotic type I signal peptidase, at 1,026,692 to 1,027,438 Atu1034
Group Condition Atu1030 Atu1031 Atu1032 Atu1033 Atu1034
lb_cucumber_cotlyden LB_cucumber_cotlyden -5.2 -0.8 -0.1 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.3 -0.6 -0.1 N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.0 -0.6 -0.3 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.4 -0.3 -0.2 N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.4 -0.7 +0.2 N.D. N.D.
carbon source acetate (C) -5.3 -0.3 -0.4 N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.6 -1.2 -0.1 N.D. N.D.
lb_ntabacum_leaf LB_Ntabacum_leaf -5.4 -0.4 -0.1 N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.3 -0.1 -0.3 N.D. N.D.
nitrogen source L-Valine (N) -5.3 -0.5 +0.1 N.D. N.D.
nitrogen source L-Threonine (N) -5.4 -0.5 +0.2 N.D. N.D.
stress R2A with bromate 5 mM -5.5 -0.5 +0.3 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.4 -0.5 +0.3 N.D. N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.8 -0.9 +0.1 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.4 -0.3 +0.1 N.D. N.D.
nitrogen source 2,6-diaminopimelic (N) -5.3 -0.5 +0.2 N.D. N.D.
carbon source D-Mannitol (C) -5.4 +0.1 -0.3 N.D. N.D.
carbon source palatinose (C) -5.4 +0.3 -0.2 N.D. N.D.
nitrogen source 5-Aminovaleric (N) -5.6 +0.2 +0.1 N.D. N.D.
nitrogen source L-pyroglutamic (N) -5.6 +0.1 +0.2 N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.3 -0.3 +0.4 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.3 +0.3 -0.2 N.D. N.D.
stress R2A with Calcium Chloride Dihydrate 87.5 mM -5.2 -0.3 +0.4 N.D. N.D.
nitrogen source Betaine (N) -5.5 +0.0 +0.3 N.D. N.D.
lb LB -5.3 +0.5 -0.2 N.D. N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.3 +0.6 -0.1 N.D. N.D.
nitrogen source Hydantoin (N) -5.4 +0.5 +0.1 N.D. N.D.
nitrogen source L-Valine (N) -5.2 +0.4 +0.2 N.D. N.D.
stress R2A with Paraquat dichloride 0.75 mM -5.5 +0.8 +0.1 N.D. N.D.
carbon source Sucrose (C) -5.2 +0.5 +0.2 N.D. N.D.
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