Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1027 and Atu1028 are separated by 213 nucleotidesAtu1028 and Atu1029 are separated by 392 nucleotidesAtu1029 and Atu1030 are separated by 132 nucleotidesAtu1030 and Atu1031 are separated by 157 nucleotides Atu1027: Atu1027 - methyl-accepting chemotaxis protein, at 1,019,464 to 1,020,963 Atu1027 Atu1028: Atu1028 - hypothetical protein, at 1,021,177 to 1,021,746 Atu1028 Atu1029: Atu1029 - DNA-directed RNA polymerase omega subunit, at 1,022,139 to 1,022,528 Atu1029 Atu1030: Atu1030 - GTP pyrophosphohydrolase/synthetase, RelA/SpoT family, at 1,022,661 to 1,024,895 Atu1030 Atu1031: Atu1031 - hypothetical protein, at 1,025,053 to 1,025,238 Atu1031
Group Condition Atu1027 Atu1028 Atu1029 Atu1030 Atu1031
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -2.4 N.D. -5.3 -0.6
stress R2A with Calcium Chloride Dihydrate 87.5 mM -0.1 -2.3 N.D. -5.2 -0.3
stress R2A with m-arsenite 0.8 mM +0.0 -2.7 N.D. -4.8 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -1.4 N.D. -5.4 -0.7
carbon source Glutaric (C) +0.0 -2.4 N.D. -5.1 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.8 N.D. -5.4 -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -2.7 N.D. -3.6 -1.2
stress R2A with Calcium Chloride Dihydrate 87.5 mM -0.0 -2.2 N.D. -5.0 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -1.9 N.D. -3.8 -1.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -1.3 N.D. -4.8 -0.9
carbon source Glutaric (C) +0.1 -1.9 N.D. -5.1 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -1.1 N.D. -5.4 -0.5
carbon source Maltitol (C) +0.0 -1.3 N.D. -5.1 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -1.9 N.D. -3.9 -0.9
carbon source Beta-alanine (C) +0.0 -1.7 N.D. -5.2 -0.1
stress R2A with bromate 5 mM +0.1 -1.1 N.D. -5.5 -0.5
nitrogen source L-Valine (N) -0.0 -1.1 N.D. -5.3 -0.5
nitrogen source L-Phenylalanine (N) +0.0 -1.4 N.D. -5.3 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 -1.5 N.D. -4.9 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -1.7 N.D. -5.3 +0.3
carbon source DL-glyceraldehyde (C) -0.1 -1.8 N.D. -5.0 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 -1.6 N.D. -5.1 +0.3
stress R2A with Sisomicin 0.001 mM +0.4 -2.1 N.D. -4.0 -0.8
nitrogen source L-Cysteine (N) -0.0 -1.6 N.D. -5.0 +0.3
nitrogen source L-Valine (N) +0.1 -1.7 N.D. -5.2 +0.4
nitrogen source Hydantoin (N) -0.0 -1.4 N.D. -5.4 +0.5
carbon source Dihydroxyacetone (C) +0.0 -1.6 N.D. -5.0 +0.4
r2a_control R2A control +0.3 -2.8 N.D. -3.9 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -2.6 N.D. -3.8 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -3.1 N.D. -3.3 +0.6
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