Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1023 and Atu1024 are separated by 64 nucleotidesAtu1024 and Atu1025 are separated by 163 nucleotidesAtu1025 and Atu1026 are separated by 64 nucleotidesAtu1026 and Atu1027 are separated by 57 nucleotides Atu1023: Atu1023 - hypothetical protein, at 1,017,268 to 1,017,564 Atu1023 Atu1024: Atu1024 - dihydrodipicolinate synthase, at 1,017,629 to 1,018,513 Atu1024 Atu1025: Atu1025 - SSRA-binding protein, at 1,018,677 to 1,019,159 Atu1025 Atu1026: Atu1026 - hypothetical protein, at 1,019,224 to 1,019,406 Atu1026 Atu1027: Atu1027 - methyl-accepting chemotaxis protein, at 1,019,464 to 1,020,963 Atu1027
Group Condition Atu1023 Atu1024 Atu1025 Atu1026 Atu1027
phage AgroPhage_E04 +0.3 N.D. N.D. -4.1 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. N.D. -1.7 -0.1
phage AgroPhage_E10 -3.1 N.D. N.D. +1.0 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. N.D. -0.8 -0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.3 N.D. N.D. -0.4 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 N.D. N.D. -1.9 +0.0
carbon source D-Saccharic potassium salt (C) -0.9 N.D. N.D. -1.0 +0.0
phage AgroPhage_F03 -0.7 N.D. N.D. -0.9 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.4 N.D. N.D. -0.2 -0.1
phage AgroPhage_C04 -0.9 N.D. N.D. -0.7 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. -1.3 -0.5
phage AgroPhage_D04 -1.1 N.D. N.D. -0.5 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 N.D. N.D. -1.4 +0.1
phage AgroPhage_A01 +0.3 N.D. N.D. -1.2 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.3 N.D. N.D. +0.5 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 N.D. N.D. -0.9 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.0 N.D. N.D. +0.5 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 N.D. N.D. +0.7 -0.1
carbon source D-Saccharic potassium salt (C) -1.0 N.D. N.D. +1.1 +0.1
phage AgroPhage_C10 +0.8 N.D. N.D. -0.8 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +1.1 N.D. N.D. -0.8 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 N.D. N.D. -0.5 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.3 N.D. N.D. -0.7 -0.2
stress R2A with Nickel (II) chloride 0.05 mM -0.6 N.D. N.D. +0.3 +0.9
stress R2A with nitrate 375 mM -0.4 N.D. N.D. +0.4 +0.8
stress R2A with Cobalt chloride 0.02 mM -0.3 N.D. N.D. +0.4 +1.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 N.D. N.D. +0.7 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.5 N.D. N.D. +0.4 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.0 N.D. N.D. +2.4 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +3.3 N.D. N.D. +0.6 -0.3
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