Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1017 and Atu1018 are separated by 287 nucleotidesAtu1018 and Atu1019 are separated by 348 nucleotidesAtu1019 and Atu1020 are separated by 62 nucleotidesAtu1020 and Atu1021 are separated by 507 nucleotides Atu1017: Atu1017 - tRNA-Ser, at 1,011,012 to 1,011,102 Atu1017 Atu1018: Atu1018 - hypothetical protein, at 1,011,390 to 1,011,698 Atu1018 Atu1019: Atu1019 - hypothetical protein, at 1,012,047 to 1,012,262 Atu1019 Atu1020: Atu1020 - outer membrane protein, at 1,012,325 to 1,013,434 Atu1020 Atu1021: Atu1021 - outer membrane protein, at 1,013,942 to 1,015,039 Atu1021
Group Condition Atu1017 Atu1018 Atu1019 Atu1020 Atu1021
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.2 -0.7 N.D. -5.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.1 -0.6 N.D. -5.4
stress R2A with Vancomycin 0.009 mM N.D. +0.2 -1.9 N.D. -4.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.0 -0.1 N.D. -5.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.5 -0.1 N.D. -5.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 -0.5 N.D. -4.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.2 -0.3 N.D. -4.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 -0.6 N.D. -3.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 -0.6 N.D. -3.9
stress R2A with Vancomycin 0.009 mM N.D. -0.2 -0.5 N.D. -3.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.2 -0.3 N.D. -3.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 -0.2 N.D. -3.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 +0.3 N.D. -3.9
carbon source D-Mannose (C) N.D. +0.1 +0.1 N.D. -4.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.1 -0.8 N.D. -3.2
lb_maize LB_Maize N.D. +0.1 +0.1 N.D. -3.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 +0.0 N.D. -3.2
phage AgroPhage_F03 N.D. +0.1 +1.0 N.D. -4.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.9 -0.4 N.D. -3.7
carbon source L-Alanine (C) N.D. -0.3 +0.1 N.D. -2.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.3 +0.3 N.D. -2.9
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.4 -0.3 N.D. -3.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 +0.6 N.D. -2.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.5 -0.5 N.D. -2.6
carbon source D-Ribose (C) N.D. -0.4 +0.4 N.D. -2.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.0 +0.5 N.D. -2.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 +0.2 N.D. -2.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.4 +0.7 N.D. -2.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 -1.9 N.D. +1.1
stress R2A with Tetracycline 0.002 mM N.D. +0.2 -0.5 N.D. +2.8
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