Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0999 and Atu1000 are separated by 286 nucleotidesAtu1000 and Atu1001 are separated by 394 nucleotidesAtu1001 and Atu1002 are separated by 89 nucleotidesAtu1002 and Atu1003 are separated by 65 nucleotides Atu0999: Atu0999 - magnesium transport protein, at 995,102 to 996,475 Atu0999 Atu1000: Atu1000 - MFS permease, at 996,762 to 997,847 Atu1000 Atu1001: Atu1001 - hypothetical protein, at 998,242 to 999,150 Atu1001 Atu1002: Atu1002 - Aminotransferase class-III, at 999,240 to 1,000,670 Atu1002 Atu1003: Atu1003 - hypothetical protein, at 1,000,736 to 1,001,206 Atu1003
Group Condition Atu0999 Atu1000 Atu1001 Atu1002 Atu1003
lb LB -5.1 -0.1 -0.2 -0.3 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.4 -0.2 -0.3 -0.7 -0.4
stress Gallic Acid 5 mM -4.8 +0.0 +0.1 -0.0 -0.1
stress 4-Hydroxybenzoic Acid 5 mM -4.7 -0.1 +0.4 -0.1 -0.1
pH R2A pH 5.5 -4.5 +0.1 -0.0 +0.1 -0.1
lb LB -4.5 -0.0 +0.0 -0.2 +0.3
stress 4-Hydroxybenzoic Acid 5 mM -4.1 -0.1 +0.2 +0.0 -0.2
carbon source D-Mannitol (C) -3.8 -0.1 -0.0 -0.1 -0.2
carbon source D-Mannitol (C) -3.6 -0.1 +0.0 -0.1 -0.1
stress Gallic Acid 5 mM -4.3 +0.1 +0.3 +0.0 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.6 +0.1 -0.4 +0.0 -0.1
lb control LB control -3.8 +0.2 -0.1 -0.1 -0.1
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -3.6 +0.0 -0.1 +0.1 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.5 -0.1 -0.0 -0.0 -0.2
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -3.7 +0.0 +0.0 -0.1 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.4 +0.1 -0.2 +0.0 -0.1
pH R2A pH 5.5 -3.9 +0.2 +0.2 +0.0 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.8 +0.1 +0.1 -0.1 +0.1
lb_maize LB_Maize -3.8 +0.2 -0.1 +0.1 +0.0
lb control LB control -3.6 +0.1 +0.0 -0.1 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.6 +0.0 +0.2 +0.1 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.3 +0.1 +0.4 -0.3 -0.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.6 +0.0 +0.3 -0.2 -0.1
lb_wheat LB_wheat -3.6 +0.1 +0.1 -0.0 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.4 +0.1 +0.1 -0.1 +0.0
lb_wheat LB_wheat -3.6 +0.1 -0.0 +0.1 +0.1
lb_wheat LB_wheat -3.2 +0.1 -0.2 +0.3 -0.1
carbon source D-Xylose (C) -3.1 -0.1 +0.3 +0.1 -0.2
lb control LB control -3.3 +0.1 -0.0 +0.2 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.5 +0.1 +0.1 +0.2 +0.1
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