Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0993 and Atu0994 are separated by 350 nucleotidesAtu0994 and Atu0995 are separated by 446 nucleotidesAtu0995 and Atu0996 are separated by 83 nucleotidesAtu0996 and Atu0997 are separated by 104 nucleotides Atu0993: Atu0993 - transcriptional regulator, TetR family, at 988,649 to 989,275 Atu0993 Atu0994: Atu0994 - electrotransfer ubiquinone oxidoreductase, at 989,626 to 991,290 Atu0994 Atu0995: Atu0995 - hypothetical protein, at 991,737 to 992,480 Atu0995 Atu0996: Atu0996 - zinc-binding dehydrogenase, at 992,564 to 993,580 Atu0996 Atu0997: Atu0997 - hypothetical protein, at 993,685 to 994,074 Atu0997
Group Condition Atu0993 Atu0994 Atu0995 Atu0996 Atu0997
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.3 N.D. -0.8 -0.0 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 N.D. -1.0 -0.5 -0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. -1.7 +0.3 -0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 N.D. -1.3 -0.1 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. -2.2 +0.5 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. -2.1 +0.2 +0.4
phage AgroPhage_E10 +0.2 N.D. -0.7 -0.7 +0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. -0.2 -0.5 -0.7
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 N.D. -1.4 +0.4 +0.2
stress R2A with hypochlorite 6.25 mM +0.5 N.D. -0.7 +0.2 -0.7
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. -0.3 +0.1 +0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. -0.5 +0.8 -0.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. -0.3 -0.5 +0.9
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. -0.6 -0.3 +0.9
phage AgroPhage_F04 +0.3 N.D. -0.1 -0.7 +0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 N.D. -0.6 +0.0 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. -0.4 -0.2 +1.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. -0.2 +0.3 +1.4
nitrogen source DL-2-Aminobutyric (N) +1.5 N.D. -0.5 +0.4 -0.4
stress R2A with Ceftazidime 4 mM +0.2 N.D. +1.5 -0.3 -0.3
stress R2A with m-arsenite 0.8 mM +0.1 N.D. +1.2 +0.5 -0.3
stress R2A with Ceftazidime 4 mM +0.5 N.D. +1.4 +0.1 -0.3
stress R2A with Bacitracin 0.6 mM -0.0 N.D. +1.9 +0.2 -0.2
stress R2A with Bacitracin 0.6 mM +0.2 N.D. +2.0 +0.2 -0.3
stress R2A with Vancomycin 0.009 mM +0.4 N.D. +1.5 +0.1 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 N.D. +0.4 +0.8 +0.8
carbon source L-ascorbate (C) -0.1 N.D. +0.3 +1.9 +1.8
carbon source L-ascorbate (C) +0.1 N.D. +0.8 +2.5 +2.5
stress R2A with Tetracycline 0.002 mM +0.2 N.D. +5.9 +0.1 +0.1
stress R2A with Tetracycline 0.002 mM -0.2 N.D. +5.9 +0.7 +0.1
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