Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0990 and Atu0991 are separated by 181 nucleotidesAtu0991 and Atu0992 are separated by 34 nucleotidesAtu0992 and Atu0993 are separated by 61 nucleotidesAtu0993 and Atu0994 are separated by 350 nucleotides Atu0990: Atu0990 - NAD/NADP dependent oxidoreductase, at 985,793 to 986,581 Atu0990 Atu0991: Atu0991 - cation efflux system component, at 986,763 to 987,683 Atu0991 Atu0992: Atu0992 - permease, at 987,718 to 988,587 Atu0992 Atu0993: Atu0993 - transcriptional regulator, TetR family, at 988,649 to 989,275 Atu0993 Atu0994: Atu0994 - electrotransfer ubiquinone oxidoreductase, at 989,626 to 991,290 Atu0994
Group Condition Atu0990 Atu0991 Atu0992 Atu0993 Atu0994
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.2 +0.1 -2.3 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.5 -0.4 -0.1 N.D.
phage AgroPhage_E04 -0.2 -0.2 -0.3 -0.5 N.D.
lb LB -0.2 -0.1 -0.1 -0.6 N.D.
pH R2A pH 5.5 +0.1 -0.1 -0.3 -0.6 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 +0.0 -0.8 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.3 -0.3 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.0 +0.1 -1.0 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.0 +0.1 -0.8 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.3 -0.4 -0.4 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 +0.2 -0.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.3 -0.4 -0.3 N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.1 -0.3 +0.4 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 +0.5 -0.2 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 -0.0 +0.3 -0.3 N.D.
stress R2A with hypochlorite 6.25 mM +0.1 -0.2 -0.2 +0.5 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.6 -0.3 -0.2 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.2 +0.4 -0.3 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 +0.3 +0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 +0.2 +0.5 -0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.6 -0.3 N.D.
carbon source D-Sorbitol (C) +0.1 -0.1 +0.3 +0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 +0.1 +0.6 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.1 +0.3 +0.7 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.2 +0.3 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 +0.2 +0.2 +0.4 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 +0.3 +0.2 +0.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.0 +0.5 +0.7 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.0 +1.1 N.D.
nitrogen source DL-2-Aminobutyric (N) +0.2 +0.3 +0.7 +1.5 N.D.
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