Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0987 and Atu0988 are separated by 43 nucleotidesAtu0988 and Atu0989 are separated by 483 nucleotidesAtu0989 and Atu0990 are separated by 21 nucleotidesAtu0990 and Atu0991 are separated by 181 nucleotides Atu0987: Atu0987 - DNA polymerase, at 982,150 to 983,040 Atu0987 Atu0988: Atu0988 - molecular chaperone, Hsp70 family, at 983,084 to 984,382 Atu0988 Atu0989: Atu0989 - hypothetical protein, at 984,866 to 985,771 Atu0989 Atu0990: Atu0990 - NAD/NADP dependent oxidoreductase, at 985,793 to 986,581 Atu0990 Atu0991: Atu0991 - cation efflux system component, at 986,763 to 987,683 Atu0991
Group Condition Atu0987 Atu0988 Atu0989 Atu0990 Atu0991
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 -1.1 -0.5 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 -0.2 -0.3 -0.5
phage phage 95.1 N.D. -0.3 -0.4 -0.1 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 -0.5 +0.1 -0.1
phage AgroPhage_B01 N.D. -0.3 -0.3 -0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 -0.3 -0.1 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.1 -0.2 +0.2 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 -0.4 +0.0 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.2 -0.5 -0.1 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 -0.4 +0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 -0.6 +0.0 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.1 -0.6 +0.2 +0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 -0.2 +0.1 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.4 -0.3 +0.1 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 -0.6 +0.4 -0.3
lb_arabidopsis_leaf LB_arabidopsis_leaf N.D. +0.4 -0.3 +0.1 -0.0
r2a_control R2A control N.D. -0.3 +0.4 -0.1 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.2 -0.5 +0.1 +0.2
phage AgroPhage_E10 N.D. -0.2 +0.5 -0.0 -0.1
lb_sorghum_leaf LB_sorghum_leaf N.D. +0.5 -0.3 -0.0 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -0.1 +0.3 +0.2 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 +0.1 +0.2 +0.2
stress R2A with Chloride 700 mM N.D. +0.2 +0.3 +0.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.1 -0.2 +0.3 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.2 +0.2 +0.1 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.5 +0.2 +0.1 +0.1
carbon source gluconate (C) N.D. +0.3 +0.2 +0.1 +0.3
no phage P2L5 N.D. +0.1 +0.2 +0.5 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 +0.5 +0.3 +0.1
nitrogen source DL-2-Aminobutyric (N) N.D. +0.9 +0.2 +0.2 +0.3
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