Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0985 and Atu0986 are separated by 294 nucleotidesAtu0986 and Atu0987 are separated by 50 nucleotidesAtu0987 and Atu0988 are separated by 43 nucleotidesAtu0988 and Atu0989 are separated by 483 nucleotides Atu0985: Atu0985 - permease, at 980,681 to 981,616 Atu0985 Atu0986: Atu0986 - hypothetical protein, at 981,911 to 982,099 Atu0986 Atu0987: Atu0987 - DNA polymerase, at 982,150 to 983,040 Atu0987 Atu0988: Atu0988 - molecular chaperone, Hsp70 family, at 983,084 to 984,382 Atu0988 Atu0989: Atu0989 - hypothetical protein, at 984,866 to 985,771 Atu0989
Group Condition Atu0985 Atu0986 Atu0987 Atu0988 Atu0989
phage AgroPhage_C04 -0.2 -2.8 N.D. -0.4 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -3.3 N.D. -0.1 +0.0
phage phage 99.2 -0.7 -1.6 N.D. -0.2 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -2.1 N.D. -0.2 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -1.0 N.D. -0.0 -0.2
stress R2A with Vancomycin 0.009 mM -0.1 -2.3 N.D. +0.2 +0.2
phage AgroPhage_D10 +0.2 -1.8 N.D. -0.1 +0.1
nitrogen source L-Methionine (N) +0.2 -1.4 N.D. -0.1 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.7 N.D. +0.3 -0.6
phage AgroPhage_B01 +0.4 -0.9 N.D. -0.3 -0.3
carbon source L-ascorbate (C) +0.1 -1.2 N.D. +0.2 -0.3
carbon source gluconate (C) +0.3 -1.6 N.D. +0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.4 +0.8 N.D. -0.0 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.3 +1.2 N.D. -0.0 -0.2
phage phage 95.1 -0.4 +0.8 N.D. -0.3 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 -1.0 N.D. +0.1 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -1.0 N.D. +0.3 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 +1.0 N.D. -0.0 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.6 N.D. +0.2 -1.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +1.1 N.D. -0.4 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.5 N.D. +0.4 -0.3
nitrogen source DL-2-Aminobutyric (N) +1.1 -1.7 N.D. +0.9 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 +1.3 N.D. -0.0 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +1.4 N.D. -0.1 -0.3
phage AgroPhage_F10 +0.3 +1.2 N.D. -0.2 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +1.3 N.D. -0.3 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.3 N.D. +0.1 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +1.5 N.D. +0.1 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +1.3 N.D. +0.4 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +2.7 N.D. +0.1 -0.1
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