Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu0981 and Atu0982 are separated by 219 nucleotidesAtu0982 and Atu0983 are separated by 226 nucleotidesAtu0983 and Atu0984 are separated by 136 nucleotidesAtu0984 and Atu0985 are separated by 462 nucleotides Atu0981: Atu0981 - glutamate-ammonia-ligase adenylyltransferase, at 971,364 to 974,330 Atu0981 Atu0982: Atu0982 - two component sensor kinase, at 974,550 to 976,886 Atu0982 Atu0983: Atu0983 - hypothetical protein, at 977,113 to 977,433 Atu0983 Atu0984: Atu0984 - aminopeptidase N, at 977,570 to 980,218 Atu0984 Atu0985: Atu0985 - permease, at 980,681 to 981,616 Atu0985
Group Condition Atu0981 Atu0982 Atu0983 Atu0984 Atu0985
carbon source D-Galacturonic Acid (C) -2.8 N.D. -0.5 +0.3 -0.0
carbon source D-Galacturonic Acid (C) -2.6 N.D. -0.2 +0.1 -0.1
carbon source D-Saccharic potassium salt (C) -1.4 N.D. -1.0 -0.0 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.9 N.D. -0.2 -0.1 -1.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -1.0 N.D. -0.1 -0.1 -1.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 N.D. -0.4 -0.1 -1.3
carbon source NAG (C) -2.4 N.D. -0.1 +0.1 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 N.D. -0.0 -0.2 -1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 N.D. -0.2 -0.4 -0.3
carbon source NAG (C) -2.5 N.D. +0.0 +0.4 +0.2
carbon source D-Saccharic potassium salt (C) -1.6 N.D. -0.1 -0.2 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 N.D. +0.2 -0.1 -0.8
carbon source Xylitol (C) -1.5 N.D. -0.4 +0.4 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 N.D. -0.0 +0.1 -0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. -1.4 -0.2 +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 N.D. +0.4 +0.2 -1.0
carbon source L-(+)-Erythrulose (C) -1.2 N.D. -0.3 +0.0 +0.2
phage AgroPhage_E04 -0.3 N.D. -1.1 +0.4 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 N.D. -0.6 +0.3 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 N.D. -0.1 +0.4 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. +0.4 -0.6 -0.2
carbon source Xylitol (C) -1.6 N.D. +0.2 +0.3 +0.2
carbon source D-Glucosamine Hydrochloride (C) -1.2 N.D. +0.2 +0.3 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 N.D. -0.6 +0.2 +0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.2 N.D. +0.9 +0.0 -0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 N.D. +0.8 +0.3 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. +1.4 -0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 N.D. +1.4 -0.1 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. +0.8 +0.3 +0.6
nitrogen source DL-2-Aminobutyric (N) +2.2 N.D. -1.2 +4.3 +1.1
remove
Atu0981
plot		 remove
Atu0982
plot		 remove
Atu0983		 remove
Atu0984
plot		 remove
Atu0985
plot