Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu0957 and Atu0958 overlap by 29 nucleotidesAtu0958 and Atu0959 are separated by 176 nucleotidesAtu0959 and Atu0960 are separated by 7 nucleotidesAtu0960 and Atu0961 are separated by 258 nucleotides Atu0957: Atu0957 - phage phi-C31 major capsid gp36-like protein, at 946,037 to 947,305 Atu0957 Atu0958: Atu0958 - hypothetical protein, at 947,277 to 948,131 Atu0958 Atu0959: Atu0959 - hypothetical protein, at 948,308 to 948,703 Atu0959 Atu0960: Atu0960 - MFS permease, at 948,711 to 949,817 Atu0960 Atu0961: Atu0961 - hypothetical protein, at 950,076 to 950,690 Atu0961
Group Condition Atu0957 Atu0958 Atu0959 Atu0960 Atu0961
Atjh2 -0.2 -0.2 -0.4 -0.3 -0.5
phage AgroPhage_E10 +0.1 -0.3 +0.1 +0.6 -1.3
Atjh14 +0.5 -0.0 -0.3 -0.6 -0.3
phage AgroPhage_C10 +0.1 +0.1 -0.5 +0.6 -0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 -0.7 -0.1 -0.3
phage AgroPhage_A07 +0.1 +0.1 +0.3 +0.1 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.3 -0.5 -0.4 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.3 -0.4 -0.3 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 +0.6 -0.2 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 -0.1 -0.3 +0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.1 -0.5 +0.3 +0.4 -0.2
phage AgroPhage_C04 +0.3 -0.1 -0.7 +0.5 +0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 -0.7 -0.1 +1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.4 +0.3 +0.7 -0.2
phage AgroPhage_D04 +0.3 +0.0 +0.5 +0.3 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.0 +1.1 -0.0 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.2 +0.4 -0.2 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.0 +0.4 -0.3 +0.6
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 -0.0 -0.2 -0.4 +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.5 -0.4 +0.1 +0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +0.5 -0.4 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.2 -0.4 +0.7 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 +0.5 -0.2 +0.8
lb_tobacco_leaf LB_Tobacco_Leaf +0.1 -0.2 +0.4 +0.4 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 +0.4 -0.2 +0.8
nophagecontrol No phage control +0.2 -0.2 +0.1 +0.7 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.9 +0.1 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 -0.1 +0.3 +0.5
stress Chloramphenicol 12.5 ug/mL -0.1 -0.1 +0.7 +0.0 +1.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.8 -0.2 +0.5
remove
Atu0957
plot		 remove
Atu0958
plot		 remove
Atu0959		 remove
Atu0960
plot		 remove
Atu0961
plot