Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0942	Atu0943	Atu0944	Atu0945	Atu0946
stress	R2A with Paraquat dichloride 0.75 mM	-2.0	-1.2	-0.1	-0.1	-0.2
nitrogen source	L-Lysine (N)	+0.1	-0.3	+0.1	+0.0	-3.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-2.1	-0.3	-0.2	-0.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-2.3	+0.2	-0.8	-0.1
nitrogen source	L-Lysine (N)	+0.1	-0.0	+0.0	+0.0	-2.6
phage	AgroPhage_C04	-0.0	-1.3	-0.2	-0.3	-0.3
nitrogen source	2,6-diaminopimelic (N)	-0.0	+0.1	+0.1	+0.1	-2.2
nitrogen source	2,6-diaminopimelic (N)	+0.1	+0.0	+0.1	+0.2	-2.4
stress	R2A with m-arsenite 0.8 mM	+0.2	-0.3	-0.0	-0.4	-1.3
stress	R2A with Paraquat dichloride 0.75 mM	-2.2	+0.0	+0.1	+0.1	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	-1.9	+0.1	-0.2	+0.2
phage	AgroPhage_D07	-0.0	-1.5	+0.2	-0.0	-0.1
lb_ntabacum_leaf	LB_Ntabacum_leaf	+0.0	+0.4	-0.1	-0.1	-1.7
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	-0.9	+0.1	-0.0	-0.7
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-1.3	-0.0	-0.3	+0.0
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.3	+0.1	-0.6	-0.6
lb	LB	+0.1	+0.4	+0.0	-0.1	-1.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-1.0	+0.2	-0.2	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	-0.6	+0.5	-0.3	-0.4
stress	R2A with Vancomycin 0.009 mM	-0.0	-0.8	+0.2	-0.1	+0.7
lb	LB	+0.2	+0.6	+0.2	-0.0	-1.0
stress	R2A with Vancomycin 0.009 mM	-0.4	-0.1	-0.2	-0.6	+1.3
in planta	Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.3	+1.2	+0.0	+0.1	-0.2
carbon source	L-Sorbose (C)	+0.2	+1.1	+0.0	-0.4	-0.0
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+1.1	-0.2	+0.1	-0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.0	+1.1	+0.4	-0.1	-0.5
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.5	+1.2	-0.2	-0.1	-0.4
carbon source	D-Galacturonic Acid (C)	+0.5	+1.1	-0.0	-0.3	-0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.9	+0.5	+0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	+3.2	+0.3	-0.0	-0.2