Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0930 and Atu0931 are separated by 345 nucleotidesAtu0931 and Atu0932 are separated by 178 nucleotidesAtu0932 and Atu0933 are separated by 111 nucleotidesAtu0933 and Atu0934 are separated by 27 nucleotides Atu0930: Atu0930 - hypothetical protein, at 918,455 to 919,900 Atu0930 Atu0931: Atu0931 - penicillin binding protein, at 920,246 to 922,519 Atu0931 Atu0932: Atu0932 - hypothetical protein, at 922,698 to 923,177 Atu0932 Atu0933: Atu0933 - beta-lactamase class D, at 923,289 to 924,113 Atu0933 Atu0934: Atu0934 - hypothetical protein, at 924,141 to 924,476 Atu0934
Group Condition Atu0930 Atu0931 Atu0932 Atu0933 Atu0934
stress methyl jasmonate 5 mM -0.1 -2.6 +0.1 -0.2 -0.3
stress methyl jasmonate 5 mM -0.0 -2.1 +0.1 -0.0 -0.3
carbon source L-ascorbate (C) +0.1 -2.2 +0.1 +0.1 -0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.8 -0.4 +0.2 -0.8
stress R2A with hypochlorite 6.25 mM +0.2 -2.3 -0.1 +0.3 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -1.9 -0.2 -0.1 +0.8
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -1.0 -0.3 -0.3 +0.4
carbon source L-ascorbate (C) +0.1 -1.7 +0.3 -0.1 -0.1
stress R2A with Magnesium sulfate 400 mM -0.0 -1.7 -0.1 +0.5 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -1.8 +0.5 +0.2 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -1.0 -0.7 -0.2 +0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -1.2 +0.6 +0.3 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.5 +0.8 -0.7 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -1.6 +0.3 -0.0 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -1.0 +0.8 -0.3 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.8 -0.3 -0.3 +0.6
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.6 +0.6 +0.4 -0.3
nitrogen source DL-2-Aminobutyric (N) +0.0 -0.7 -0.5 +2.1 -0.1
phage AgroPhage_H10 -0.0 +0.9 +0.6 -0.2 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -1.0 +0.4 +0.5 +0.7
phage AgroPhage_F04 -0.3 +1.8 +0.2 +0.0 -0.1
carbon source L-(+)-Erythrulose (C) -0.1 +1.9 +0.1 -0.1 -0.1
phage AgroPhage_E04 -0.2 +1.9 +0.6 +0.0 -0.4
phage AgroPhage_D04 -0.1 +1.8 -0.3 +0.6 -0.0
phage AgroPhage_E10 -0.3 +1.8 +0.7 +0.4 -0.3
carbon source sarcosine (C) +0.1 +2.7 -0.0 +0.1 -0.3
phage AgroPhage_F10 +0.0 +1.7 +0.3 +0.6 +0.1
phage AgroPhage_D10 +0.0 +1.7 +0.1 +0.8 +0.2
stress R2A with Vancomycin 0.009 mM -0.1 +3.6 -0.3 +0.4 -0.0
stress R2A with Vancomycin 0.009 mM -0.0 +4.6 +0.1 +0.0 +0.2
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