Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0919 and Atu0920 are separated by 212 nucleotidesAtu0920 and Atu0921 are separated by 487 nucleotidesAtu0921 and Atu8087 overlap by 38 nucleotidesAtu8087 and Atu0922 are separated by 262 nucleotides Atu0919: Atu0919 - hypothetical protein, at 907,305 to 907,721 Atu0919 Atu0920: Atu0920 - hypothetical protein, at 907,934 to 908,359 Atu0920 Atu0921: Atu0921 - two component sensor kinase, at 908,847 to 910,379 Atu0921 Atu8087: Atu8087 - putative peptidoglycan binding protein, at 910,342 to 911,262 Atu8087 Atu0922: Atu0922 - hypothetical protein, at 911,525 to 911,881 Atu0922
Group Condition Atu0919 Atu0920 Atu0921 Atu8087 Atu0922
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.4 N.D. -3.0 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 N.D. -2.8 -0.6
stress Erythromycin 12.5 ug/mL N.D. -1.8 N.D. -1.2 -0.7
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.0 N.D. -3.5 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.6 N.D. -2.3 -0.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 N.D. -2.3 -0.8
No phage control N.D. -0.3 N.D. -2.7 -0.3
Atjh10 N.D. +0.1 N.D. -3.0 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 N.D. -3.2 +0.2
stress R2A with Bacitracin 0.6 mM N.D. -0.7 N.D. -2.7 +0.3
Atjh2 N.D. +0.1 N.D. -2.9 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 N.D. -3.0 -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.0 N.D. -2.0 +0.6
phage AgroPhage_F04 N.D. +0.4 N.D. -2.4 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 N.D. -3.2 +1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 N.D. -2.9 +0.6
Atjh2 N.D. +0.6 N.D. -3.2 +0.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.0 N.D. -2.9 +0.8
phage Phage 95.3 + bacteria N.D. +0.7 N.D. -2.6 +0.1
nophagecontrol No phage control N.D. +0.1 N.D. -2.7 +0.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.8 N.D. -1.5 +0.8
Atjh10 N.D. +0.8 N.D. -2.3 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 N.D. -2.3 +1.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 N.D. -1.6 +1.2
phage AgroPhage_D04 N.D. +1.2 N.D. -2.2 +0.6
stress R2A with Vancomycin 0.009 mM N.D. -3.5 N.D. +6.2 -1.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 N.D. -1.0 +2.3
stress R2A with Vancomycin 0.009 mM N.D. -4.5 N.D. +7.7 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.2 N.D. +2.4 +1.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.7 N.D. +3.7 +0.7
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