Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0914	Atu0915	Atu0916	Atu0917	Atu0918
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	N.D.	-0.5	-0.4
	Atjh14	N.D.	N.D.	N.D.	-0.6	-0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	N.D.	-0.7	+0.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	N.D.	-0.6	+0.3
no phage	P3L5	N.D.	N.D.	N.D.	-0.6	+0.4
in planta	Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	N.D.	+0.3	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	N.D.	+0.3	-0.4
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	N.D.	-0.5	+0.5
in planta	Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	N.D.	+0.5	-0.4
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	N.D.	-0.2	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	N.D.	N.D.	-0.1	+0.7
phage	AgroPhage_C04	N.D.	N.D.	N.D.	+0.7	-0.2
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	N.D.	N.D.	N.D.	+0.7	-0.0
stress	R2A with tungstate 375 mM	N.D.	N.D.	N.D.	-0.2	+0.8
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	N.D.	+0.8	-0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	N.D.	N.D.	N.D.	+0.3	+0.4
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	N.D.	N.D.	N.D.	+0.5	+0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	N.D.	N.D.	N.D.	+0.4	+0.4
stress	R2A with tungstate 375 mM	N.D.	N.D.	N.D.	+0.4	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	N.D.	N.D.	+0.4	+0.4
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	N.D.	N.D.	N.D.	+0.4	+0.4
carbon source	Xylitol (C)	N.D.	N.D.	N.D.	+0.5	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	N.D.	+1.3	-0.5
nophagecontrol	No phage control	N.D.	N.D.	N.D.	+0.3	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	N.D.	N.D.	+0.3	+0.5
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	N.D.	N.D.	N.D.	+0.6	+0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	N.D.	N.D.	N.D.	+0.7	+0.3
stress	R2A with Bacitracin 0.6 mM	N.D.	N.D.	N.D.	+0.6	+0.4
nophagecontrol	No phage control	N.D.	N.D.	N.D.	+0.6	+0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	N.D.	N.D.	N.D.	+1.0	+0.2