Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0898 and Atu0899 are separated by 104 nucleotidesAtu0899 and Atu0900 are separated by 41 nucleotidesAtu0900 and Atu0901 are separated by 149 nucleotidesAtu0901 and Atu0902 are separated by 310 nucleotides Atu0898: Atu0898 - hypothetical protein, at 889,694 to 890,095 Atu0898 Atu0899: Atu0899 - dihydrodipicolinate synthase, at 890,200 to 891,108 Atu0899 Atu0900: Atu0900 - hypothetical protein, at 891,150 to 891,896 Atu0900 Atu0901: Atu0901 - 6-O-methylguanine-DNA methyltransferase, at 892,046 to 893,182 Atu0901 Atu0902: Atu0902 - hypothetical protein, at 893,493 to 894,653 Atu0902
Group Condition Atu0898 Atu0899 Atu0900 Atu0901 Atu0902
nophagecontrol No phage control -0.5 -0.7 -0.0 -0.3 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.8 -0.2 +0.0 -0.1
phage AgroPhage_F10 -0.2 -0.1 -0.4 -0.3 -0.2
phage AgroPhage_H04 -0.4 -0.2 +0.1 -0.3 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.7 -0.1 -0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.7 -0.2 +0.0 -0.1 +0.2
phage AgroPhage_D04 -0.3 -0.5 +0.0 +0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.4 +0.0 +0.2 -0.2 +0.3
nitrogen source DL-2-Aminobutyric (N) +0.6 -0.1 -0.3 -0.2 -0.1
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 +0.3 +0.2 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.4 -0.4 +0.2 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 +0.3 -0.2 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.5 -0.3 -0.0 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 -0.4 +0.1 -0.3 +0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.0 -0.3 -0.4 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.7 -0.3 +0.1 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 -0.1 -0.4 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +0.2 -0.4 +0.1 -0.1
phage AgroPhage_E10 +0.1 +0.7 +0.0 -0.4 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 +0.4 -0.1 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.6 -0.2 +0.3 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.8 +0.1 +0.2 +0.0
carbon source D-Saccharic potassium salt (C) -0.2 +0.7 -0.0 -0.2 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.3 +0.1 +0.2 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.8 -0.1 +0.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.2 +0.1 +0.3 +0.4
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 +0.4 +0.3 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.5 -0.1 +0.4 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.2 +0.6 +0.1 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +0.7 +0.2 +0.3 +0.1
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