Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0884 and Atu0885 are separated by 4 nucleotidesAtu0885 and Atu0886 are separated by 104 nucleotidesAtu0886 and Atu0887 are separated by 21 nucleotidesAtu0887 and Atu0888 are separated by 204 nucleotides Atu0884: Atu0884 - hypothetical protein, at 878,210 to 878,920 Atu0884 Atu0885: Atu0885 - hypothetical protein, at 878,925 to 879,239 Atu0885 Atu0886: Atu0886 - hypothetical protein, at 879,344 to 879,910 Atu0886 Atu0887: Atu0887 - acetyltransferase, at 879,932 to 880,420 Atu0887 Atu0888: Atu0888 - transcriptional regulator, MerR family, at 880,625 to 881,038 Atu0888
Group Condition Atu0884 Atu0885 Atu0886 Atu0887 Atu0888
stress R2A with Cadmium chloride hemipentahydrate 0.02 mM +0.2 -0.3 -0.5 +0.1 -8.6
stress R2A with Cadmium chloride hemipentahydrate 0.02 mM -0.0 -0.2 +0.1 -0.1 -8.4
stress R2A with Zinc chloride 0.05 mM -0.1 -0.3 +0.4 -0.1 -6.8
stress R2A with Zinc chloride 0.05 mM -0.2 +0.4 -0.2 -0.1 -4.9
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.8 -3.3 -0.6 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 -3.0 -0.1 -1.2
phage AgroPhage_E10 +0.6 -2.2 -1.9 -0.2 +0.1
Atjh2 -0.6 -0.3 -2.7 +0.3 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.6 -1.3 -0.1 -1.0
no phage P4L5 +0.0 -0.3 -1.8 -0.0 -1.1
stress R2A with Vancomycin 0.009 mM -0.3 -1.4 -1.3 -0.2 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 +0.2 -0.1 -2.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 -1.0 -1.0 +0.2 -0.6
stress R2A with tungstate 375 mM +0.4 -0.5 -2.1 +0.0 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.2 +0.1 +0.1 -2.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 +0.5 -0.5 -2.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 -2.1 -0.3 +0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.0 +0.3 +0.4 -2.8
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.0 -3.2 +0.5 +1.0
phage AgroPhage_C10 +0.5 +0.4 -1.2 -0.5 -0.6
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +0.1 -2.3 -0.2 +0.7
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 -0.2 -1.6 -0.2 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.6 +1.0 -0.6 -1.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.8 -1.0 +0.0 +1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.8 +1.4 -0.0 -2.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.1 -0.0 +1.4 +0.1 -1.6
phage AgroPhage_F10 -0.4 -0.9 +1.6 -0.0 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 -0.8 +0.4 +1.6
lb_sorghum x54 243 LB_Sorghum X54 243 -0.3 +0.1 +1.4 -0.2 +1.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.6 +0.8 -0.4 +1.4
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