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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu0872 and Atu0873 are separated by 226 nucleotides
Atu0873 and Atu0874 are separated by 96 nucleotides
Atu0874 and Atu0875 are separated by 5 nucleotides
Atu0875 and Atu0876 are separated by 85 nucleotides
Atu0872: Atu0872 - methyl-accepting chemotaxis protein, at 868,168 to 870,525
Atu0872
Atu0873: Atu0873 - transcriptional regulator, LysR family, at 870,752 to 871,639
Atu0873
Atu0874: Atu0874 - acetyltransferase, at 871,736 to 872,278
Atu0874
Atu0875: Atu0875 - hypothetical protein, at 872,284 to 872,763
Atu0875
Atu0876: Atu0876 - superoxide dismutase, at 872,849 to 873,451
Atu0876
Group
Condition
Atu0872
Atu0873
Atu0874
Atu0875
Atu0876
carbon source
m-Inositol (C)
-0.1
+0.0
-0.3
-0.0
-6.0
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
-0.6
-0.5
-0.1
-5.1
carbon source
Sucrose (C)
-0.0
-0.2
+0.1
-0.1
-5.9
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
+0.0
-0.1
-0.7
-5.1
carbon source
Melibiose (C)
-0.1
-0.0
-0.0
+0.1
-5.9
carbon source
Stachyose (C)
-0.1
-0.2
+0.0
+0.2
-5.8
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.0
+0.1
-0.5
-0.4
-5.1
carbon source
D-Raffinose (C)
-0.1
-0.1
-0.1
+0.3
-5.8
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
-0.2
+0.4
-0.2
+0.1
-5.8
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.0
-0.4
+0.2
-0.9
-4.5
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
-0.1
-0.2
-0.3
-5.0
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
+0.1
-0.0
-0.1
-5.2
carbon source
methyl-beta-L-arabinopyranoside (C)
-0.0
+0.1
-0.2
+0.1
-5.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.2
+0.1
-0.2
-4.8
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
+0.1
+0.4
-0.3
-5.2
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.1
-0.0
+0.1
-5.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.2
+0.1
+0.3
-5.0
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
-0.3
-0.1
+0.5
-5.0
phage
AgroPhage_F04
+0.3
-0.0
-0.2
+0.1
-4.9
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
+0.2
-0.2
-0.1
-4.9
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
+0.1
+0.2
+0.1
-5.2
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-0.2
+0.4
+0.1
-5.0
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
+0.2
+0.3
-0.0
-4.8
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.0
+0.4
-0.2
-4.7
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
+0.2
+0.5
+0.1
-4.9
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.0
-0.1
-0.1
+1.0
-4.7
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.1
+0.0
+0.4
-4.6
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.5
+0.5
-0.1
-4.6
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
+0.4
+1.0
+0.7
-5.1
nitrogen source
DL-2-Aminobutyric (N)
+0.3
+0.1
+1.3
-0.3
+4.1
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