Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0858 and Atu0859 overlap by 4 nucleotidesAtu0859 and Atu0860 are separated by 57 nucleotidesAtu0860 and Atu0861 are separated by 40 nucleotidesAtu0861 and Atu0862 are separated by 88 nucleotides Atu0858: Atu0858 - putative carboxymuconolactone decarboxylase, at 857,425 to 857,958 Atu0858 Atu0859: Atu0859 - hypothetical protein, at 857,955 to 858,305 Atu0859 Atu0860: Atu0860 - hypothetical protein, at 858,363 to 859,925 Atu0860 Atu0861: Atu0861 - hypothetical protein, at 859,966 to 860,151 Atu0861 Atu0862: Atu0862 - hypothetical protein, at 860,240 to 860,635 Atu0862
Group Condition Atu0858 Atu0859 Atu0860 Atu0861 Atu0862
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 +0.3 +0.2 -0.5 -1.4
nitrogen source L-Serine (N) -0.2 -0.6 -0.1 -0.6 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.6 -0.3 -0.6 -0.6
phage AgroPhage_D10 -0.0 -0.6 +0.4 -1.2 +0.3
phage AgroPhage_F10 +0.2 -0.5 +0.2 -0.7 -0.2
carbon source p-Coumaric (C) -0.0 +0.3 +0.2 -0.6 -0.7
nitrogen source Carnitine Hydrochloride (N) -0.3 +0.6 +0.1 -0.8 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -1.0 -0.2 -0.3 +0.6
stress Chloramphenicol 12.5 ug/mL -0.2 +0.5 +0.1 -0.8 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.0 -0.1 +0.8 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.7 +0.2 -0.4 -0.3
nitrogen source DL-2-Aminobutyric (N) +0.6 +0.2 -0.2 -0.7 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.1 -0.1 +0.2 +0.8 -0.7
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.6 +0.2 -0.8 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.6 +0.1 -0.7 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.9 +0.2 -0.8 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.3 +0.1 +0.7 -0.7
phage AgroPhage_C04 -0.2 -0.4 +1.0 -0.4 +0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.6 +0.4 +0.9 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -0.5 +0.1 +0.3 +0.9
stress Chloramphenicol 12.5 ug/mL -0.5 +0.8 -0.0 +0.8 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.4 -0.2 +0.8 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.2 -0.2 +1.2 -0.1
phage AgroPhage_C10 -0.0 +0.4 +1.3 -0.7 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.8 +0.1 +0.4 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.4 +0.1 +0.5 +0.5
stress R2A with tungstate 375 mM +0.3 +0.6 +0.1 +0.3 +0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.7 -0.0 +1.2 +0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.6 -0.1 +1.9 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +1.1 +0.0 +1.1 +0.3
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