Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu0856 and Atu0857 are separated by 252 nucleotidesAtu0857 and Atu0858 overlap by 47 nucleotidesAtu0858 and Atu0859 overlap by 4 nucleotidesAtu0859 and Atu0860 are separated by 57 nucleotides Atu0856: Atu0856 - transcriptional regulator, LysR family, at 855,732 to 856,496 Atu0856 Atu0857: Atu0857 - oxidoreductase, at 856,749 to 857,471 Atu0857 Atu0858: Atu0858 - putative carboxymuconolactone decarboxylase, at 857,425 to 857,958 Atu0858 Atu0859: Atu0859 - hypothetical protein, at 857,955 to 858,305 Atu0859 Atu0860: Atu0860 - hypothetical protein, at 858,363 to 859,925 Atu0860
Group Condition Atu0856 Atu0857 Atu0858 Atu0859 Atu0860
Atjh14 -0.5 -0.7 -0.2 +0.8 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 +0.4 -0.6 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 -0.4 +0.4 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +0.2 -1.0 -0.2
Atjh2 -0.4 -0.0 -0.4 +0.5 -0.2
phage AgroPhage_F04 -0.3 +0.2 -0.2 -0.5 +0.3
Atjh2 -0.3 -0.3 -0.2 +0.9 -0.3
stress Chloramphenicol 12.5 ug/mL -0.1 -0.4 -0.5 +0.8 -0.0
Atjh10 -0.2 -0.3 -0.3 +0.6 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.2 -0.3 +0.6 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.3 -0.8 +0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.0 +0.0 -0.5 -0.3
phage AgroPhage_C04 -0.3 +0.0 -0.2 -0.4 +1.0
phage AgroPhage_H04 +0.3 +0.2 -0.5 +0.3 -0.2
Atjh10 -0.2 -0.1 -0.4 +1.0 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 +0.2 -0.6 +0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 +0.2 -0.5 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.1 +0.3 -0.4 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.6 -0.5 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.1 +1.1 +0.0
phage phage 95.1 +0.3 -0.5 +0.1 +0.6 +0.2
nitrogen source DL-2-Aminobutyric (N) +0.3 -0.2 +0.6 +0.2 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.3 -0.3 +0.7 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 +0.3 +0.1 -0.1 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 +0.4 +0.5 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.1 +0.3 +0.9 +0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.0 +0.5 +0.6 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.9 -0.1 +0.5 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +1.0 +0.2 +0.2 -0.1
phage AgroPhage_C10 +0.2 +0.3 -0.0 +0.4 +1.3
remove
Atu0856
plot		 remove
Atu0857
plot		 remove
Atu0858		 remove
Atu0859
plot		 remove
Atu0860
plot