Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0827	Atu0828	Atu0829	Atu0830	Atu8138
nitrogen source	Choline chloride (N)	+0.2	-2.8	-2.8	-2.9	-0.4
nitrogen source	Choline chloride (N)	+0.0	-2.1	-2.9	-2.7	+0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.2	-0.2	+0.0	-3.8
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.4	-0.4	-0.2	-3.7
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.1	-0.2	-0.2	-4.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.1	-0.4	-0.2	-3.8
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.7	-0.3	-0.1	-2.7
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	-0.0	-0.2	-0.2	-3.3
in planta	Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	-0.5	-0.1	+0.0	-3.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.1	-0.2	-0.0	-2.8
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	-0.0	-0.3	-0.1	-3.0
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.1	+0.0	+0.2	-3.7
stress	R2A with Vancomycin 0.009 mM	-0.2	-0.3	-0.2	-0.8	-1.7
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.1	-0.1	-0.1	-2.7
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.1	-0.2	+0.0	-2.9
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.1	+0.0	-0.1	-0.2	-1.7
stress	R2A with Tetracycline 0.002 mM	+0.2	-0.3	+0.0	+0.1	-3.1
stress	R2A with Vancomycin 0.009 mM	-0.1	-0.2	-0.3	-0.7	-1.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.7	+0.1	-0.1	+0.1	-2.3
phage	phage 100.2	-0.2	-0.0	-0.2	-0.2	-2.2
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.5	-0.2	-0.2	-1.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.1	+0.1	+0.2	-2.5
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.1	-0.1	+0.4	-2.5
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.5	-0.0	-0.0	-2.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.3	+0.2	-0.0	+0.1	-2.1
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	+0.1	-0.6	+0.3	-1.6
nitrogen source	DL-2-Aminobutyric (N)	+0.7	+0.7	-0.1	+0.1	-1.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+1.2	+0.1	+0.0	+0.2	-1.3
phage	AgroPhage_D04	-0.8	-0.4	+0.0	-0.1	+1.7
phage	AgroPhage_C10	-0.1	-0.2	-0.2	-0.2	+1.9