Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0826	Atu0827	Atu0828	Atu0829	Atu0830
nitrogen source	Choline chloride (N)	-0.2	+0.2	-2.8	-2.8	-2.9
nitrogen source	Choline chloride (N)	-0.1	+0.0	-2.1	-2.9	-2.7
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-1.1	+0.0	-0.1	-0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.3	-0.4	-0.4	-0.3
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.5	-0.5	-0.2	-0.2
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.1	-0.7	-0.3	-0.1
stress	R2A with Vancomycin 0.009 mM	+0.0	-0.2	-0.3	-0.2	-0.8
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.3	-0.4	-0.3	-0.3	-0.2
stress	R2A with Vancomycin 0.009 mM	+0.0	-0.1	-0.2	-0.3	-0.7
phage	AgroPhage_D04	+0.2	-0.8	-0.4	+0.0	-0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.2	-0.9	-0.2	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	-0.8	-0.4	-0.2	+0.3
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.4	-0.4	-0.4	-0.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.4	-0.1	-0.4	-0.2
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.3	-0.6	+0.1	-0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.3	-0.6	-0.2	+0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.2	+0.6	-0.3	-0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.4	-0.1	-0.3	+0.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.7	-0.1	+0.0	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	-0.5	+0.3	+0.4	-0.0
carbon source	D-Sorbitol (C)	-0.1	+0.5	+0.3	-0.2	-0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.5	+0.1	-0.6	+0.3
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.7	-0.2	-0.1	-0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.3	-0.1	-0.3	+0.6
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.6	+0.6	-0.2	-0.2
phage	AgroPhage_F04	+0.3	-0.2	+0.4	+0.1	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+1.2	+0.1	+0.0	+0.2
phage	AgroPhage_D10	+0.6	+0.4	+0.2	-0.1	+0.2
phage	AgroPhage_E10	+0.4	+0.4	+0.4	+0.3	-0.1
nitrogen source	DL-2-Aminobutyric (N)	+0.4	+0.7	+0.7	-0.1	+0.1