Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0815	Atu0816	Atu0817	Atu0818	Atu0819
carbon source	NAG (C)	-0.1	-0.8	-0.9	-0.9	-1.1
carbon source	NAG (C)	-0.3	-1.0	-1.0	-0.9	-0.4
carbon source	NAG (C)	+0.2	-1.0	-1.0	-1.1	-0.3
nitrogen source	L-Arginine (N)	-0.0	-0.8	-0.9	-0.8	-0.6
nitrogen source	L-Threonine (N)	-0.3	-0.6	-0.8	-0.7	-0.4
carbon source	NAG (C)	+0.3	-0.9	-1.0	-1.0	-0.1
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.1	-0.9	-0.8	-0.9	-0.1
nitrogen source	NAG (N)	-0.2	-0.4	-0.6	-0.5	-0.6
stress	R2A with Vancomycin 0.009 mM	-0.3	-0.4	-0.5	-0.4	-0.7
nitrogen source	L-Histidine (N)	-0.4	-0.4	-0.6	-0.5	-0.3
nitrogen source	L-Arginine (N)	-0.0	-0.7	-0.7	-0.7	-0.1
nitrogen source	L-Threonine (N)	+0.1	-0.6	-0.8	-0.7	-0.2
carbon source	p-Coumaric (C)	-0.0	-0.5	-0.4	-0.5	-0.8
nitrogen source	NAG (N)	-0.2	-0.6	-0.6	-0.5	-0.3
phage	AgroPhage_F10	-1.4	+0.0	+0.2	-0.1	-0.6
carbon source	D-Glucose-6-Phosphate (C)	+0.2	-0.7	-0.3	-0.6	-0.5
carbon source	p-Coumaric (C)	+0.2	-0.4	-0.5	-0.5	-0.6
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-1.1	-0.4	-0.1	-0.4	+0.2
stress	R2A with hypochlorite 6.25 mM	+0.3	-0.6	-0.6	-0.5	-0.4
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.1	-0.4	-0.8	+0.0	+0.8
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	-1.0	-0.1	+0.4	-0.5	-0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	-0.9	-0.1	+0.6	-0.4	-0.1
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.1	-0.3	+0.2	+1.3
nitrogen source	DL-2-Aminobutyric (N)	+1.3	-0.4	-0.5	-0.3	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.3	-0.1	-0.1	+0.2	-0.4
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.8	+0.2	-0.3	-0.2	+0.6
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.1	-0.1	-0.1	+1.8
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.9	+0.2	-0.5	+0.2	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+2.2	-0.1	-0.4	+0.2	+0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+1.0	+0.2	+0.0	-0.1	+1.0