Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0814	Atu0815	Atu0816	Atu0817	Atu0818
carbon source	NAG (C)	N.D.	-0.3	-1.0	-1.0	-0.9
carbon source	NAG (C)	N.D.	+0.2	-1.0	-1.0	-1.1
carbon source	NAG (C)	N.D.	+0.3	-1.0	-1.0	-1.0
carbon source	NAG (C)	N.D.	-0.1	-0.8	-0.9	-0.9
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	N.D.	-0.1	-0.9	-0.8	-0.8
nitrogen source	L-Arginine (N)	N.D.	-0.0	-0.8	-0.9	-0.8
nitrogen source	L-Threonine (N)	N.D.	-0.3	-0.6	-0.8	-0.7
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	-1.1	-0.4	-0.8	+0.0
nitrogen source	L-Arginine (N)	N.D.	-0.0	-0.7	-0.7	-0.8
nitrogen source	L-Threonine (N)	N.D.	+0.1	-0.6	-0.8	-0.7
nitrogen source	L-Histidine (N)	N.D.	-0.4	-0.4	-0.6	-0.5
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	N.D.	-1.1	-0.4	-0.1	-0.4
nitrogen source	NAG (N)	N.D.	-0.2	-0.6	-0.6	-0.5
carbon source	Sucrose (C)	N.D.	-0.4	-0.6	-0.4	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	N.D.	-0.8	-0.1	-0.0	-0.9
nitrogen source	NAG (N)	N.D.	-0.2	-0.4	-0.6	-0.5
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)	N.D.	-0.0	-0.5	-0.5	-0.7
carbon source	D-Glucose-6-Phosphate (C)	N.D.	-0.1	-0.7	-0.4	-0.6
phage	AgroPhage_B07	N.D.	-1.1	-0.1	+0.1	-0.4
carbon source	D-Glucose-6-Phosphate (C)	N.D.	+0.2	-0.7	-0.3	-0.6
phage	AgroPhage_F10	N.D.	-1.4	+0.0	+0.2	-0.1
stress	R2A with hypochlorite 6.25 mM	N.D.	+0.3	-0.6	-0.6	-0.5
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	N.D.	-1.0	-0.1	+0.4	-0.5
carbon source	Sucrose (C)	N.D.	+0.3	-0.4	-0.4	-0.6
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	N.D.	-0.9	-0.1	+0.6	-0.4
nitrogen source	DL-2-Aminobutyric (N)	N.D.	+1.3	-0.4	-0.5	-0.3
stress	Chloramphenicol 12.5 ug/mL	N.D.	-0.5	+0.6	+0.3	+0.2
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	N.D.	+0.9	+0.2	-0.5	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	+1.3	-0.1	-0.1	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+2.2	-0.1	-0.4	+0.2