Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0805 and Atu0806 are separated by 254 nucleotidesAtu0806 and Atu0807 are separated by 178 nucleotidesAtu0807 and Atu0808 are separated by 203 nucleotidesAtu0808 and Atu0809 are separated by 12 nucleotides Atu0805: Atu0805 - hypothetical protein, at 806,549 to 807,022 Atu0805 Atu0806: Atu0806 - hypothetical protein, at 807,277 to 808,197 Atu0806 Atu0807: Atu0807 - metallo-beta-lactamase superfamily protein, at 808,376 to 809,284 Atu0807 Atu0808: Atu0808 - tRNA-Gln, at 809,488 to 809,562 Atu0808 Atu0809: Atu0809 - hypothetical protein, at 809,575 to 809,886 Atu0809
Group Condition Atu0805 Atu0806 Atu0807 Atu0808 Atu0809
carbon source p-Coumaric (C) +0.0 +0.1 -3.7 N.D. -0.7
carbon source p-Coumaric (C) -0.3 +0.1 -3.4 N.D. -0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 -0.0 N.D. -2.7
carbon source Phloretic Acid (C) -0.1 +0.0 -2.8 N.D. +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 +0.2 N.D. -2.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.4 -0.0 N.D. -1.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.1 -1.0 N.D. -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.5 -0.6 N.D. -1.0
carbon source Methyl alpha-D-glucopyranoside (C) -0.1 -0.0 +0.3 N.D. -1.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.1 +0.5 N.D. -2.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.1 +0.5 N.D. -1.6
carbon source Phloretic Acid (C) -0.0 +0.2 -1.9 N.D. +0.6
carbon source Ferulic Acid (C) +0.1 +0.1 -1.8 N.D. +0.7
carbon source L-ascorbate (C) +0.1 -0.4 -0.8 N.D. +0.9
stress R2A with m-arsenite 0.8 mM +0.6 -0.0 +0.6 N.D. -1.1
stress R2A with Vancomycin 0.009 mM +0.4 +1.6 +0.1 N.D. -1.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.2 -0.6 N.D. +1.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.3 -0.3 N.D. +1.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.2 -0.5 N.D. +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 -0.2 -0.4 N.D. +0.9
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.1 +0.0 N.D. +1.6
phage AgroPhage_D10 -0.2 +0.7 -0.3 N.D. +1.0
phage AgroPhage_D04 -0.2 +0.5 -0.1 N.D. +1.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 -0.2 N.D. +2.1
phage AgroPhage_F04 -0.1 +0.7 +0.2 N.D. +1.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.1 +0.7 N.D. +1.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 +0.6 N.D. +0.8
phage AgroPhage_F10 +0.2 +0.7 +0.6 N.D. +0.7
phage AgroPhage_E04 -0.0 +0.9 +0.5 N.D. +1.2
phage AgroPhage_E10 +0.8 +0.8 -1.0 N.D. +2.3
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