Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0794 and Atu0795 are separated by 151 nucleotidesAtu0795 and Atu0796 are separated by 51 nucleotidesAtu0796 and Atu0797 are separated by 48 nucleotidesAtu0797 and Atu0798 overlap by 4 nucleotides Atu0794: Atu0794 - cell cycle regulated site-specific DNA-methyltransferase protein, at 790,755 to 791,900 Atu0794 Atu0795: Atu0795 - hypothetical protein, at 792,052 to 792,285 Atu0795 Atu0796: Atu0796 - putative peptidase, at 792,337 to 793,092 Atu0796 Atu0797: Atu0797 - hydrolase, at 793,141 to 793,752 Atu0797 Atu0798: Atu0798 - A/G-specific adenine glycosylase, at 793,749 to 794,852 Atu0798
Group Condition Atu0794 Atu0795 Atu0796 Atu0797 Atu0798
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -2.6 -0.3 -0.3 +0.0
phage AgroPhage_D10 N.D. -1.0 -0.4 -0.7 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.9 -0.5 +0.1 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.4 -0.0 +0.3 +0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.9 +0.3 -0.4 +0.2
phage AgroPhage_E10 N.D. -1.0 -0.2 -0.9 +0.3
stress R2A with Kanamycin sulfate 0.02 mM N.D. -1.2 -0.4 -0.1 +0.1
no phage P1L4 N.D. -1.1 -0.5 +0.1 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.0 -0.3 -0.3 +0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -1.3 +0.0 -0.2 +0.2
carbon source Rhamnogalacturonan - from potato (C) N.D. -1.5 +0.1 -0.0 +0.2
carbon source Sucrose (C) N.D. -1.3 -0.3 +0.4 +0.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.2 +0.4 -0.5 +0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.1 -0.1 +0.3 +0.1
nitrogen source DL-2-Aminobutyric (N) N.D. -1.8 +1.1 +0.5 -0.3
phage AgroPhage_F04 N.D. -0.9 -0.2 +0.2 +0.4
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. +0.9 -0.6 -0.3 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +1.4 -0.6 -0.5 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.6 -0.6 +0.4 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 +0.6 +0.5 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +1.0 -0.4 +0.2 +0.1
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. +1.4 -0.3 +0.0 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.7 -0.4 +0.5 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.7 -0.5 +0.5 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.8 -0.2 +0.4 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +1.3 -0.2 +0.2 +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +1.4 -0.0 +0.3 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +1.3 +0.3 -0.5 +0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +1.7 +0.7 +0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +3.8 +0.4 +0.1 -0.0
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