Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu8136 and Atu0794 are separated by 236 nucleotidesAtu0794 and Atu0795 are separated by 151 nucleotidesAtu0795 and Atu0796 are separated by 51 nucleotidesAtu0796 and Atu0797 are separated by 48 nucleotides Atu8136: Atu8136 - hypothetical protein, at 789,418 to 790,518 Atu8136 Atu0794: Atu0794 - cell cycle regulated site-specific DNA-methyltransferase protein, at 790,755 to 791,900 Atu0794 Atu0795: Atu0795 - hypothetical protein, at 792,052 to 792,285 Atu0795 Atu0796: Atu0796 - putative peptidase, at 792,337 to 793,092 Atu0796 Atu0797: Atu0797 - hydrolase, at 793,141 to 793,752 Atu0797
Group Condition Atu8136 Atu0794 Atu0795 Atu0796 Atu0797
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 N.D. -2.5 -0.3 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 N.D. -1.9 -0.5 +0.1
phage AgroPhage_D10 -0.1 N.D. -1.1 -0.4 -0.7
phage AgroPhage_E10 -0.1 N.D. -1.0 -0.2 -1.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. -1.9 +0.3 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. -2.4 -0.0 +0.3
stress Chloramphenicol 6.25 ug/mL +0.0 N.D. -1.6 -0.2 +0.1
no phage P1L4 -0.1 N.D. -1.1 -0.5 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. -1.0 -0.3 -0.3
phage AgroPhage_F04 -0.5 N.D. -0.9 -0.2 +0.2
stress Chloramphenicol 12.5 ug/mL +0.3 N.D. -1.3 -0.4 -0.1
carbon source Sucrose (C) +0.1 N.D. -1.3 -0.3 +0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 N.D. -1.2 +0.4 -0.5
carbon source Rhamnogalacturonan - from potato (C) +0.4 N.D. -1.5 +0.1 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 N.D. -0.8 +0.5 +0.1
nitrogen source DL-2-Aminobutyric (N) -0.4 N.D. -1.9 +1.1 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 N.D. -0.5 +0.7 -0.0
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.1 N.D. +0.9 -0.6 -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. +0.6 -0.6 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. +1.4 -0.6 -0.5
Atjh10 -0.2 N.D. +1.0 -0.5 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. +0.7 -0.5 +0.5
Atjh14 -0.9 N.D. +1.0 +0.0 +0.5
carbon source D-(+)-melezitose (C) -0.6 N.D. +0.9 +0.2 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 N.D. +1.3 -0.2 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. +1.3 +0.3 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. -0.5 +0.6 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 N.D. +1.4 -0.0 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. +1.7 +0.7 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 N.D. +3.8 +0.4 +0.1
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