Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0787 and Atu0788 are separated by 68 nucleotidesAtu0788 and Atu0789 are separated by 212 nucleotidesAtu0789 and Atu0790 are separated by 10 nucleotidesAtu0790 and Atu0791 are separated by 214 nucleotides Atu0787: Atu0787 - threonine synthase, at 784,519 to 786,090 Atu0787 Atu0788: Atu0788 - hypothetical protein, at 786,159 to 786,731 Atu0788 Atu0789: Atu0789 - hypothetical protein, at 786,944 to 787,129 Atu0789 Atu0790: Atu0790 - hypothetical protein, at 787,140 to 787,829 Atu0790 Atu0791: Atu0791 - transcriptional regulator, GntR family, at 788,044 to 788,724 Atu0791
Group Condition Atu0787 Atu0788 Atu0789 Atu0790 Atu0791
carbon source D-Glucosamine Hydrochloride (C) N.D. -0.1 N.D. -6.6 -0.2
carbon source NAG (C) N.D. +0.2 N.D. -6.4 -0.0
carbon source D-Glucosamine Hydrochloride (C) N.D. -0.3 N.D. -5.3 -0.2
carbon source NAG (C) N.D. +0.1 N.D. -4.4 -0.1
carbon source NAG (C) N.D. -0.3 N.D. -3.5 -0.1
carbon source NAG (C) N.D. -0.2 N.D. -3.0 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.7 N.D. -0.8 -1.1
nitrogen source NAG (N) N.D. -0.2 N.D. -2.0 -0.0
stress Erythromycin 12.5 ug/mL N.D. -2.2 N.D. -0.0 +0.1
stress Erythromycin 12.5 ug/mL N.D. -1.6 N.D. -0.1 -0.3
stress R2A with Vancomycin 0.009 mM N.D. -1.9 N.D. +0.7 -0.6
stress Dodecyl Sulfate 0.2 mM N.D. -1.9 N.D. +0.3 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.2 N.D. -0.1 -0.3
stress R2A with Vancomycin 0.009 mM N.D. -2.0 N.D. +0.8 -0.4
nitrogen source NAG (N) N.D. +0.2 N.D. -1.9 +0.1
stress methyl jasmonate 5 mM N.D. -1.6 N.D. +0.2 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.8 N.D. -0.4 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 N.D. -0.8 -0.3
in planta Bethi_Library_OD0.5 N.D. -0.7 N.D. -0.6 -0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.9 N.D. -0.3 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 N.D. -0.5 -0.8
stress Dodecyl Sulfate 0.2 mM N.D. -1.3 N.D. +0.3 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 N.D. -0.7 -0.4
phage AgroPhage_D04 N.D. -0.6 N.D. +0.4 -0.5
carbon source L-ascorbate (C) N.D. -0.3 N.D. -0.5 +0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.7 N.D. -0.7 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.2 N.D. +1.3 -0.5
stress Streptomycin 200 ug/mL N.D. -0.3 N.D. +1.0 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.6 N.D. +0.9 -0.5
nitrogen source DL-2-Aminobutyric (N) N.D. +0.3 N.D. +1.1 -0.1
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