Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0784 and Atu0785 overlap by 4 nucleotidesAtu0785 and Atu0786 are separated by 93 nucleotidesAtu0786 and Atu0787 are separated by 21 nucleotidesAtu0787 and Atu0788 are separated by 68 nucleotides Atu0784: Atu0784 - hypothetical protein, at 779,594 to 782,509 Atu0784 Atu0785: Atu0785 - ribosomal-protein (S5)-alanine N-acetyltransferase, at 782,506 to 783,105 Atu0785 Atu0786: Atu0786 - peptidase, family M16, at 783,199 to 784,497 Atu0786 Atu0787: Atu0787 - threonine synthase, at 784,519 to 786,090 Atu0787 Atu0788: Atu0788 - hypothetical protein, at 786,159 to 786,731 Atu0788
Group Condition Atu0784 Atu0785 Atu0786 Atu0787 Atu0788
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.6 -0.7 -0.7 N.D. -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.9 -0.6 -1.3 N.D. -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.6 -0.2 -0.8 N.D. -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.7 +0.1 -1.0 N.D. +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.5 -0.9 -0.9 N.D. +0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.8 -0.8 +0.1 N.D. -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.7 -0.1 -0.9 N.D. -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.9 -0.2 -0.9 N.D. -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -3.1 -0.3 -0.7 N.D. +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.7 +0.0 -1.0 N.D. -0.0
stress D(+)-Carvone 5 mM -3.0 -0.3 +0.3 N.D. -0.7
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.6 +0.3 -0.3 N.D. -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -3.1 -0.4 -0.3 N.D. +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -2.9 +0.2 -0.6 N.D. +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.6 +0.7 -0.2 N.D. +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -3.0 +0.4 -0.1 N.D. -0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.0 +0.2 -0.5 N.D. +0.3
nophagecontrol No phage control -3.5 +0.2 -0.0 N.D. +0.3
stress methyl jasmonate 5 mM -1.7 +0.1 +0.5 N.D. -1.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.5 -0.4 -0.3 N.D. +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +1.9 -1.5 N.D. -0.1
stress R2A with Vancomycin 0.009 mM +0.1 +0.4 +2.4 N.D. -2.0
phage AgroPhage_E04 +2.1 -0.4 -0.9 N.D. +0.6
stress R2A with Vancomycin 0.009 mM -0.3 +0.9 +3.1 N.D. -1.9
phage AgroPhage_E10 +3.9 -0.0 -1.5 N.D. -0.2
phage AgroPhage_F04 +3.0 -0.5 -0.0 N.D. -0.1
phage AgroPhage_D10 +3.1 -0.1 +0.1 N.D. -0.3
phage AgroPhage_D04 +3.9 -0.3 -0.0 N.D. -0.6
phage AgroPhage_F10 +4.0 +0.8 -0.5 N.D. -0.4
carbon source L-ascorbate (C) +1.5 +0.3 +2.8 N.D. -0.3
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