Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0776 and Atu0777 are separated by 176 nucleotidesAtu0777 and Atu0778 are separated by 14 nucleotidesAtu0778 and Atu0779 are separated by 342 nucleotidesAtu0779 and Atu0780 are separated by 100 nucleotides Atu0776: Atu0776 - ribonuclease H, at 771,839 to 772,279 Atu0776 Atu0777: Atu0777 - hypothetical protein, at 772,456 to 772,764 Atu0777 Atu0778: Atu0778 - hypothetical protein, at 772,779 to 775,319 Atu0778 Atu0779: Atu0779 - peroxiredoxin, at 775,662 to 776,147 Atu0779 Atu0780: Atu0780 - hypothetical protein, at 776,248 to 777,096 Atu0780
Group Condition Atu0776 Atu0777 Atu0778 Atu0779 Atu0780
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -4.0 -0.0 +0.0 -1.1
phage AgroPhage_H10 N.D. -4.5 -0.0 -0.5 -0.0
phage AgroPhage_H04 N.D. -4.4 -0.0 -0.3 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. -3.9 -0.0 -0.2 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -3.6 -0.1 -0.3 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. -3.8 -0.1 -0.4 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -3.4 -0.0 -0.2 -0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -4.0 -0.1 -0.3 +0.1
phage AgroPhage_F10 N.D. -3.3 -0.2 -0.0 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. -3.8 -0.1 -0.2 +0.1
phage AgroPhage_C10 N.D. -3.3 -0.0 -0.9 +0.2
stress R2A with Tetracycline 0.002 mM N.D. -1.7 +0.1 -0.1 -1.9
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.3 -0.1 -0.3 -0.8
carbon source Rhamnogalacturonan - from potato (C) N.D. -3.1 +0.1 -0.0 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -2.1 -0.2 +0.1 -0.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.4 -0.0 +0.1 -1.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -2.3 -0.0 -0.3 -0.2
phage AgroPhage_E10 N.D. -2.6 -0.3 -0.1 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. -2.3 +0.0 -0.4 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -2.2 +0.1 -0.3 -0.2
lb_sorghum x50 665 LB_Sorghum X50 665 N.D. -2.5 +0.0 +0.1 -0.2
lb_sorghum f72 f505 LB_Sorghum F72 F505 N.D. -2.2 -0.1 +0.1 -0.4
stress R2A with Tetracycline 0.002 mM N.D. -0.1 +0.2 -0.4 -2.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.3 -0.2 +0.8 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.9 +0.2 -0.1 -0.6
nophagecontrol No phage control N.D. -2.3 -0.1 -0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -2.5 +0.1 +0.2 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +2.5 +0.3 -0.2 -0.0
stress R2A with Vancomycin 0.009 mM N.D. +0.4 -0.1 -0.3 +3.6
stress R2A with Vancomycin 0.009 mM N.D. +0.1 -0.1 +0.1 +3.7
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