Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0774 and Atu0775 are separated by 92 nucleotidesAtu0775 and Atu0776 overlap by 4 nucleotidesAtu0776 and Atu0777 are separated by 176 nucleotidesAtu0777 and Atu0778 are separated by 14 nucleotides Atu0774: Atu0774 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 769,735 to 770,781 Atu0774 Atu0775: Atu0775 - homoserine kinase, at 770,874 to 771,842 Atu0775 Atu0776: Atu0776 - ribonuclease H, at 771,839 to 772,279 Atu0776 Atu0777: Atu0777 - hypothetical protein, at 772,456 to 772,764 Atu0777 Atu0778: Atu0778 - hypothetical protein, at 772,779 to 775,319 Atu0778
Group Condition Atu0774 Atu0775 Atu0776 Atu0777 Atu0778
phage AgroPhage_H10 N.D. N.D. N.D. -4.5 -0.0
phage AgroPhage_H04 N.D. N.D. N.D. -4.4 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -4.0 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -4.0 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. N.D. -3.8 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. N.D. -3.9 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. N.D. -3.8 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -3.6 -0.1
phage AgroPhage_F10 N.D. N.D. N.D. -3.3 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. -3.4 -0.0
phage AgroPhage_C10 N.D. N.D. N.D. -3.3 -0.0
carbon source Rhamnogalacturonan - from potato (C) N.D. N.D. N.D. -3.1 +0.1
phage AgroPhage_E10 N.D. N.D. N.D. -2.6 -0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -2.3 -0.2
lb_sorghum x50 665 LB_Sorghum X50 665 N.D. N.D. N.D. -2.4 -0.1
lb_sorghum x50 665 LB_Sorghum X50 665 N.D. N.D. N.D. -2.5 +0.0
lb_tobacco_leaf LB_Tobacco_Leaf N.D. N.D. N.D. -2.4 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -2.5 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -2.3 -0.1
nophagecontrol No phage control N.D. N.D. N.D. -2.3 -0.1
lb_benthi_root LB_Benthi_root N.D. N.D. N.D. -2.4 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -2.3 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -2.3 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. N.D. -2.3 +0.0
lb_arabidopsis_leaf LB_arabidopsis_leaf N.D. N.D. N.D. -2.3 -0.0
lb_sorghum btx 430 LB_Sorghum Btx 430 N.D. N.D. N.D. -2.3 +0.1
lb_sorghum f72 f505 LB_Sorghum F72 F505 N.D. N.D. N.D. -2.2 -0.1
lb LB N.D. N.D. N.D. -2.2 +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -2.2 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +2.5 +0.3
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