Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0769 and Atu8013 overlap by 1 nucleotidesAtu8013 and Atu0770 are separated by 28 nucleotidesAtu0770 and Atu0771 are separated by 61 nucleotidesAtu0771 and Atu0772 are separated by 261 nucleotides Atu0769: Atu0769 - protoheme IX farnesyltransferase, at 765,616 to 766,569 Atu0769 Atu8013: Atu8013 - hypothetical protein, at 766,569 to 766,700 Atu8013 Atu0770: Atu0770 - cytochrome C oxidase assembly protein, at 766,729 to 767,346 Atu0770 Atu0771: Atu0771 - cytochrome c oxidase subunit III, at 767,408 to 768,283 Atu0771 Atu0772: Atu0772 - hypothetical protein, at 768,545 to 768,931 Atu0772
Group Condition Atu0769 Atu8013 Atu0770 Atu0771 Atu0772
carbon source D-Galacturonic Acid (C) -4.8 N.D. -2.4 -2.1 +0.2
carbon source NAG (C) -3.7 N.D. -2.7 -2.7 +0.3
carbon source NAG (C) -3.3 N.D. -2.6 -2.8 +0.2
carbon source L-Sorbose (C) -2.9 N.D. -2.6 -2.6 +0.1
carbon source D-Galacturonic Acid (C) -2.6 N.D. -2.8 -2.3 +0.1
carbon source L-Sorbose (C) -2.5 N.D. -2.6 -2.3 +0.2
carbon source D-(-)-lyxose (C) -3.9 N.D. -1.1 -1.4 +0.1
carbon source D-Arabinose (C) -3.8 N.D. -1.1 -1.3 -0.0
carbon source D-(-)-lyxose (C) -3.1 N.D. -1.4 -1.3 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.7 N.D. -2.6 -1.6 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.6 N.D. -0.6 -0.4 +0.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.5 N.D. -0.3 -0.6 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.7 N.D. -2.2 -1.5 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.5 N.D. -0.3 -0.7 +0.1
carbon source D-Saccharic potassium salt (C) -1.2 N.D. -1.7 -2.3 +0.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.4 N.D. -0.3 -0.4 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.8 N.D. -0.8 -1.7 +0.1
carbon source Rhamnogalacturonan - from potato (C) -5.0 N.D. -0.1 -0.3 +0.3
carbon source L-Xylose (C) -2.2 N.D. -1.5 -1.5 +0.1
carbon source Xylitol (C) -3.4 N.D. -1.1 -0.9 +0.3
carbon source L-Xylose (C) -2.1 N.D. -1.8 -1.2 +0.1
nitrogen source L-Alanine (N) -4.9 N.D. -0.2 -0.1 +0.3
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.6 N.D. -0.1 -0.4 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -3.9 N.D. -0.5 -0.8 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -4.2 N.D. -0.5 -0.3 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -4.3 N.D. -0.3 -0.2 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -3.7 N.D. -0.3 -0.8 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.4 N.D. -1.2 -1.7 +0.9
stress R2A with Vancomycin 0.009 mM +5.4 N.D. +0.5 +0.9 +0.1
stress R2A with Vancomycin 0.009 mM +5.7 N.D. +1.0 +1.3 -0.0
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