Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0758 and Atu0759 are separated by 209 nucleotidesAtu0759 and Atu0760 are separated by 56 nucleotidesAtu0760 and Atu0761 are separated by 30 nucleotidesAtu0761 and Atu0762 are separated by 213 nucleotides Atu0758: Atu0758 - molecular chaperone, DnaJ family, at 755,159 to 756,274 Atu0758 Atu0759: Atu0759 - hypothetical protein, at 756,484 to 756,933 Atu0759 Atu0760: Atu0760 - pyridoxamine 5'-phosphate oxidase, at 756,990 to 757,610 Atu0760 Atu0761: Atu0761 - hypothetical protein, at 757,641 to 758,360 Atu0761 Atu0762: Atu0762 - hypothetical protein, at 758,574 to 758,882 Atu0762
Group Condition Atu0758 Atu0759 Atu0760 Atu0761 Atu0762
stress R2A with Vancomycin 0.009 mM -0.2 -3.6 N.D. -0.2 -0.0
stress R2A with Vancomycin 0.009 mM -0.0 -3.2 N.D. +0.1 +0.2
Atjh14 -0.3 -0.4 N.D. -0.1 -1.6
stress Erythromycin 12.5 ug/mL -0.2 -1.2 N.D. -0.1 -0.6
Atjh10 -0.4 -0.1 N.D. -0.1 -1.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.4 N.D. -0.2 -1.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.6 N.D. -0.1 -1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.6 N.D. -0.6 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.2 N.D. +0.2 -2.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.4 N.D. +0.1 -1.3
phage AgroPhage_C04 -0.0 +0.2 N.D. -1.2 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 N.D. -0.0 -1.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.4 N.D. +0.0 -1.2
stress Streptomycin 200 ug/mL +0.2 -1.1 N.D. +0.2 -0.6
carbon source methyl-alpha-D-xylopyranoside (C) -0.4 -0.2 N.D. +0.2 -0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 N.D. +0.3 -0.9
stress Hygromycin B 25 ug/mL +0.0 -1.3 N.D. -0.1 +0.4
phage AgroPhage_B07 +0.2 +0.5 N.D. -0.3 -1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.2 N.D. +0.4 -0.9
phage AgroPhage_E10 +0.3 +0.8 N.D. -0.0 -1.3
stress Nerol 1.25 mM -0.2 -0.7 N.D. +0.2 +0.5
stress Chloramphenicol 12.5 ug/mL -0.1 -0.5 N.D. -0.3 +0.8
phage AgroPhage_D04 -0.0 +0.9 N.D. -0.2 -0.7
phage AgroPhage_H10 +0.1 +0.4 N.D. +0.3 -0.8
nitrogen source DL-2-Aminobutyric (N) +0.5 -0.5 N.D. +0.7 -0.7
stress Chloramphenicol 12.5 ug/mL -0.3 -0.6 N.D. +0.2 +0.8
phage AgroPhage_F10 +0.2 +0.9 N.D. +0.1 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.5 N.D. +0.2 +0.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.2 N.D. +0.5 +0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.3 -0.2 N.D. +0.0 +1.2
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