Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0745 and Atu0746 are separated by 89 nucleotidesAtu0746 and Atu0747 are separated by 260 nucleotidesAtu0747 and Atu0748 are separated by 2 nucleotidesAtu0748 and Atu0749 are separated by 25 nucleotides Atu0745: Atu0745 - 1-deoxy-D-xylulose-5-phosphate synthase, at 742,737 to 744,656 Atu0745 Atu0746: Atu0746 - hypothetical protein, at 744,746 to 745,669 Atu0746 Atu0747: Atu0747 - exodeoxyribonuclease small subunit, at 745,930 to 746,184 Atu0747 Atu0748: Atu0748 - deacetylase, at 746,187 to 747,122 Atu0748 Atu0749: Atu0749 - biotin synthesis BioY protein, at 747,148 to 747,711 Atu0749
Group Condition Atu0745 Atu0746 Atu0747 Atu0748 Atu0749
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.1 N.D. -0.2 -1.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 N.D. +0.3 -2.7
stress Indole-3-butyric 5 mM N.D. +0.1 N.D. +0.0 -2.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.2 N.D. -0.3 -0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.0 N.D. +0.0 -1.7
phage AgroPhage_C04 N.D. -1.2 N.D. +0.2 -0.7
stress Indole-3-butyric 5 mM N.D. -0.1 N.D. -0.1 -1.5
phage Phage 95.2 + bacteria N.D. -1.0 N.D. -0.1 -0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.6 N.D. +0.1 -0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 N.D. +0.4 -0.9
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.5 N.D. +0.4 +0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.5 N.D. -0.3 -0.7
no phage P2L5 N.D. -0.9 N.D. -0.2 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 N.D. +0.8 -1.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.8 N.D. -0.2 -1.0
lb_sorghum x50 665 LB_Sorghum X50 665 N.D. +0.6 N.D. +0.2 -0.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +1.3 N.D. +0.3 -1.5
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +1.2 N.D. +0.1 -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.5 N.D. +0.3 +1.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.6 N.D. -0.3 +0.8
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.4 N.D. -0.2 +1.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 N.D. +0.1 +1.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.6 N.D. +0.1 +0.9
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 N.D. +0.4 +1.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.6 N.D. +0.1 +0.9
carbon source D-Saccharic potassium salt (C) N.D. +0.7 N.D. +0.6 +0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +1.0 N.D. -0.1 +0.7
nitrogen source DL-2-Aminobutyric (N) N.D. +0.7 N.D. +0.8 +0.5
phage AgroPhage_E10 N.D. +1.0 N.D. +0.4 +0.8
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.6 N.D. +0.6 +1.3
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