Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0742 and Atu8012 are separated by 53 nucleotidesAtu8012 and Atu0743 are separated by 92 nucleotidesAtu0743 and Atu0744 are separated by 107 nucleotidesAtu0744 and Atu0745 are separated by 42 nucleotides Atu0742: Atu0742 - hypothetical protein, at 740,691 to 741,062 Atu0742 Atu8012: Atu8012 - hypothetical protein, at 741,116 to 741,337 Atu8012 Atu0743: Atu0743 - hypothetical protein, at 741,430 to 742,224 Atu0743 Atu0744: Atu0744 - hypothetical protein, at 742,332 to 742,694 Atu0744 Atu0745: Atu0745 - 1-deoxy-D-xylulose-5-phosphate synthase, at 742,737 to 744,656 Atu0745
Group Condition Atu0742 Atu8012 Atu0743 Atu0744 Atu0745
Atjh14 -0.4 -1.6 -0.1 -2.0 N.D.
phage AgroPhage_H03 -0.0 -2.6 -0.0 -0.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -2.5 +0.2 +0.0 N.D.
carbon source Xylobiose (C) -0.2 -1.2 +0.1 -0.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -1.6 +0.3 -0.3 N.D.
Atjh2 +0.1 -1.8 +0.2 +0.1 N.D.
No phage control -0.0 -1.3 -0.4 +0.3 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -0.2 -1.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -1.6 -0.0 +0.5 N.D.
Atjh10 +0.3 -1.1 +0.2 +0.4 N.D.
carbon source Rhamnogalacturonan - from potato (C) -0.3 +1.0 +0.1 -0.6 N.D.
phage AgroPhage_E10 -0.3 +1.2 +0.2 -0.8 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -1.1 +0.4 +1.1 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 +1.3 +0.1 -0.9 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.5 +0.7 -1.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 +1.6 +0.1 -0.9 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +1.2 +0.1 -0.7 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.6 -0.1 +1.0 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -1.2 +0.1 +1.8 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.6 +0.2 +1.0 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 +0.1 +1.7 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +1.0 +0.4 +0.5 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +1.4 -0.1 +0.0 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.0 +0.1 +2.0 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +1.6 +0.0 +0.5 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +1.0 +0.2 +0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2 +1.5 +0.0 +0.4 N.D.
phage AgroPhage_D10 +0.1 +1.6 +0.2 +0.3 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +1.8 -0.4 +0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +1.1 +0.9 +0.4 N.D.
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