Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0733 and Atu0734 are separated by 48 nucleotidesAtu0734 and Atu0735 are separated by 208 nucleotidesAtu0735 and Atu0736 overlap by 4 nucleotidesAtu0736 and Atu0738 are separated by 278 nucleotides Atu0733: Atu0733 - enoyl-CoA hydratase/isomerase, at 732,951 to 733,709 Atu0733 Atu0734: Atu0734 - hypothetical protein, at 733,758 to 734,114 Atu0734 Atu0735: Atu0735 - RNA methyltransferase, at 734,323 to 735,573 Atu0735 Atu0736: Atu0736 - hemolysin, at 735,570 to 736,322 Atu0736 Atu0738: Atu0738 - chemotaxis methyl-accepting protein, at 736,601 to 738,622 Atu0738
Group Condition Atu0733 Atu0734 Atu0735 Atu0736 Atu0738
Atjh15 -0.0 -0.2 -0.3 -0.7 -0.3
phage AgroPhage_E10 +0.1 +0.4 -0.3 -1.1 -0.7
phage AgroPhage_F04 +0.3 -0.5 -0.3 -0.7 -0.2
Atjh14 +0.4 -0.2 +0.2 -1.2 -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.1 +0.4 -0.2 -0.2
Atjh10 +0.3 -0.4 -0.3 -0.4 +0.0
stress R2A with Tetracycline 0.002 mM -0.3 -0.5 -0.2 +0.0 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -1.3 +0.1 -0.1 +0.4
phage AgroPhage_H04 +0.2 -0.2 +0.3 -0.6 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 -0.2 -0.3 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.4 +0.2 -0.4 +0.0
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 -0.3 -0.1 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 +0.2 -0.0 +0.0 +0.5
carbon source D-Glucose (C) -0.3 +0.5 -0.1 -0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 +0.3 +0.1 +0.1 +0.3
lb LB +0.3 +0.5 -0.2 -0.7 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 -0.2 -0.3 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -0.1 -0.5 +0.4
lb LB +0.3 +0.4 -0.1 -0.4 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.3 -0.2 -0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.4 +0.2 +0.5 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 +0.7 -0.3 +0.1 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.1 -0.3 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.4 -0.2 -0.2 +0.1
stress Streptomycin 200 ug/mL +0.1 -0.3 -0.0 +1.0 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.4 +0.7 -0.2 +0.1
stress Chloramphenicol 12.5 ug/mL -0.2 -0.2 -0.1 +1.1 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.7 +0.1 -0.0 +0.4
stress Streptomycin 200 ug/mL +0.1 +0.3 -0.0 +1.0 -0.1
nitrogen source DL-2-Aminobutyric (N) +0.8 +0.6 +0.5 -0.0 -0.2
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