Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0727 and Atu0728 are separated by 174 nucleotidesAtu0728 and Atu0730 are separated by 222 nucleotidesAtu0730 and Atu0731 are separated by 60 nucleotidesAtu0731 and Atu0732 are separated by 209 nucleotides Atu0727: Atu0727 - ferredoxin I, at 727,575 to 728,507 Atu0727 Atu0728: Atu0728 - hypothetical protein, at 728,682 to 729,143 Atu0728 Atu0730: Atu0730 - hypothetical protein, at 729,366 to 729,890 Atu0730 Atu0731: Atu0731 - divalent cation transporter, at 729,951 to 730,946 Atu0731 Atu0732: Atu0732 - acyl-CoA dehydrogenase, at 731,156 to 732,940 Atu0732
Group Condition Atu0727 Atu0728 Atu0730 Atu0731 Atu0732
nitrogen source Choline chloride (N) -3.2 -0.2 -0.3 -0.3 -0.2
nitrogen source Betaine (N) -3.5 -0.1 -0.1 -0.0 -0.1
nitrogen source Choline chloride (N) -3.1 -0.1 +0.1 -0.0 -0.1
nitrogen source Betaine (N) -3.2 +0.1 +0.3 -0.1 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -1.1 +0.1 +0.2 -1.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -0.0 -0.3 -0.4 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 -0.5 -0.7 +0.4 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.5 -0.8 -0.2 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.3 -0.3 +0.8 -0.7
phage AgroPhage_D10 +0.2 +0.2 -0.8 -0.3 -0.7
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.7 -0.5 +0.3 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.0 -1.0 +0.3 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 -0.6 +0.1 -0.5
stress R2A with Vancomycin 0.009 mM +0.1 -0.2 -0.9 -0.5 +0.5
carbon source Myristic (C) -0.5 +0.1 -0.3 +0.4 -0.7
stress Erythromycin 12.5 ug/mL +0.1 +0.4 -0.8 -0.3 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.6 +0.7 -0.0 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.5 +0.4 +0.3 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.3 -0.4 +0.5 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.4 +0.7 -0.3 +0.3
phage AgroPhage_C04 -0.2 -0.3 -0.2 +0.4 +0.7
Atjh14 -0.5 +0.0 +1.0 -0.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.5 +0.9 +0.0 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.8 -0.2 -0.1 +0.9
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.2 +1.0 +0.3 -0.2
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 +0.3 +0.5 +0.4
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +1.3 +0.3 +0.2 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.9 +0.4 +0.3 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.8 +0.7 +0.4 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.1 +0.2 +0.5 +0.9
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