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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0725 and Atu0726 are separated by 328 nucleotides
Atu0726 and Atu0727 are separated by 157 nucleotides
Atu0727 and Atu0728 are separated by 174 nucleotides
Atu0728 and Atu0730 are separated by 222 nucleotides
Atu0725: Atu0725 - hypothetical protein, at 725,233 to 725,844
Atu0725
Atu0726: Atu0726 - ring hydroxylating dioxygenase, alpha-subunit, at 726,173 to 727,417
Atu0726
Atu0727: Atu0727 - ferredoxin I, at 727,575 to 728,507
Atu0727
Atu0728: Atu0728 - hypothetical protein, at 728,682 to 729,143
Atu0728
Atu0730: Atu0730 - hypothetical protein, at 729,366 to 729,890
Atu0730
Group
Condition
Atu0725
Atu0726
Atu0727
Atu0728
Atu0730
nitrogen source
Betaine (N)
+0.2
-3.9
-3.5
-0.1
-0.1
nitrogen source
Choline chloride (N)
+0.2
-3.1
-3.2
-0.2
-0.3
nitrogen source
Betaine (N)
-0.1
-3.6
-3.2
+0.1
+0.3
nitrogen source
Choline chloride (N)
+0.4
-3.4
-3.1
-0.1
+0.1
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
-1.6
-1.1
-0.5
-0.7
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.4
-1.1
-0.5
-0.7
-0.5
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
-1.9
-0.9
-0.3
-0.3
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-1.8
-0.6
-0.3
-0.4
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
-1.6
-0.8
-0.0
-0.3
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.0
-1.2
-0.6
-1.1
+0.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-1.3
-0.5
-0.2
-0.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
-1.4
-0.6
+0.1
-0.4
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-1.5
-0.5
-0.3
-0.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.1
-1.6
-0.3
-0.1
-0.3
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
-0.3
-0.8
-0.0
-1.0
stress
R2A with Bacitracin 0.6 mM
-0.0
-1.1
-0.8
-0.2
-0.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
-1.3
-0.5
-0.1
+0.1
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.0
-1.7
-0.1
-0.5
+0.4
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.3
-1.2
-0.5
-0.1
-0.0
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.4
-1.2
-0.5
+0.1
-0.2
stress
R2A with Zinc chloride 0.05 mM
-0.2
-0.8
-0.6
+0.1
+0.3
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.6
-1.6
-0.6
+0.2
+0.2
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
-0.5
-0.3
+0.2
-0.6
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
-0.8
-0.2
-0.6
+0.7
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
-1.0
+0.2
+0.5
+0.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-1.4
-0.3
+0.9
+0.4
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.5
-0.5
-0.2
+0.2
+1.0
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.6
-0.2
+1.3
+0.3
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.6
-0.3
-0.2
+0.7
+0.3
nitrogen source
DL-2-Aminobutyric (N)
+0.6
+0.3
+0.4
-0.1
+0.8
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