Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0708 and Atu0709 are separated by 116 nucleotidesAtu0709 and Atu0710 are separated by 287 nucleotidesAtu0710 and Atu0711 are separated by 15 nucleotidesAtu0711 and Atu0712 are separated by 342 nucleotides Atu0708: Atu0708 - ABC transporter, nucleotide binding/ATPase protein, at 707,905 to 709,128 Atu0708 Atu0709: Atu0709 - mrp protein, at 709,245 to 710,411 Atu0709 Atu0710: Atu0710 - magnesium/cobalt transport protein, at 710,699 to 711,727 Atu0710 Atu0711: Atu0711 - potassium uptake protein, at 711,743 to 713,662 Atu0711 Atu0712: Atu0712 - hypothetical protein, at 714,005 to 715,186 Atu0712
Group Condition Atu0708 Atu0709 Atu0710 Atu0711 Atu0712
stress R2A with Calcium Chloride Dihydrate 87.5 mM +0.4 N.D. -1.1 -1.2 -0.6
stress R2A with Calcium Chloride Dihydrate 87.5 mM +0.2 N.D. -0.8 -0.9 -0.5
pH R2A pH 5.5 +0.1 N.D. -1.0 -0.8 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. -0.3 -0.9 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. -0.3 -0.6 -0.4
stress R2A with Chloride 700 mM +0.2 N.D. -0.2 +0.0 -1.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 N.D. -0.5 -0.5 -0.3
pH R2A pH 5.5 +0.1 N.D. -0.8 -0.6 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. -0.4 -0.7 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 N.D. -0.3 -0.8 -0.2
stress R2A with Strontium chloride 750 mM +0.2 N.D. -0.2 -0.2 -1.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 N.D. -0.4 -0.8 -0.3
carbon source D-Saccharic potassium salt (C) -0.1 N.D. -0.8 -0.4 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 N.D. -0.4 -0.5 -0.4
stress R2A with Magnesium sulfate 400 mM +0.3 N.D. -0.3 -0.0 -1.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. -0.8 -0.2 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 N.D. -0.5 -0.6 +0.1
stress R2A with Gentamicin 0.00125 mM +0.1 N.D. -0.6 -0.7 +0.2
carbon source trans-aconitic (C) +0.2 N.D. -0.6 -0.4 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. -0.6 -0.5 -0.1
carbon source L-ascorbate (C) -1.0 N.D. +0.2 +0.1 +0.0
carbon source D-Saccharic potassium salt (C) -0.2 N.D. -0.6 -0.2 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.3 N.D. +0.0 +0.4 -0.5
nitrogen source DL-2-Aminobutyric (N) +0.4 N.D. -0.5 +0.5 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 N.D. -0.1 +0.6 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 N.D. +0.3 +0.6 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 N.D. +0.3 +0.5 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 N.D. +0.7 +0.7 -0.1
stress R2A with Vancomycin 0.009 mM +0.1 N.D. +0.9 +0.9 +0.2
stress R2A with Vancomycin 0.009 mM +0.3 N.D. +0.9 +1.2 +0.2
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