Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0686 and Atu0687 are separated by 151 nucleotidesAtu0687 and Atu0688 are separated by 54 nucleotidesAtu0688 and Atu0689 are separated by 71 nucleotidesAtu0689 and Atu0690 overlap by 20 nucleotides Atu0686: Atu0686 - isoleucyl-tRNA synthetase, at 680,863 to 683,766 Atu0686 Atu0687: Atu0687 - hypothetical protein, at 683,918 to 684,547 Atu0687 Atu0688: Atu0688 - cytidine and deoxycytidylate deaminase, at 684,602 to 685,060 Atu0688 Atu0689: Atu0689 - ribosomal large subunit pseudouridine synthase B, at 685,132 to 687,141 Atu0689 Atu0690: Atu0690 - hypothetical protein, at 687,122 to 687,679 Atu0690
Group Condition Atu0686 Atu0687 Atu0688 Atu0689 Atu0690
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.3 N.D. -1.2 -3.9
stress Dodecyl Sulfate 0.2 mM N.D. -5.4 N.D. +0.0 -0.1
stress Dodecyl Sulfate 0.2 mM N.D. -5.4 N.D. -0.1 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.3 N.D. -0.7 -2.9
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.0 N.D. -0.6 -4.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -3.2 N.D. -0.7 -0.7
nitrogen source D-Alanine (N) N.D. -3.6 N.D. -0.0 -0.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.6 N.D. -0.7 -2.2
carbon source L-ascorbate (C) N.D. -3.2 N.D. -0.5 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -0.9 N.D. -0.6 -2.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 N.D. -0.9 -3.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.6 N.D. -0.1 -1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.5 N.D. -0.5 -2.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -1.1 N.D. -0.6 -1.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.5 N.D. -0.4 -1.2
stress R2A with Tetracycline 0.002 mM N.D. -0.4 N.D. -0.7 -2.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.9 N.D. -0.4 -1.8
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.5 N.D. -0.5 -1.1
nitrogen source D-Alanine (N) N.D. -2.5 N.D. -0.1 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.0 N.D. -0.7 -2.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.6 N.D. -1.1 -2.0
stress R2A with Vancomycin 0.009 mM N.D. -4.8 N.D. +0.5 +2.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +1.1 N.D. -0.5 -1.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +1.0 N.D. -0.6 -1.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +1.6 N.D. -0.9 -0.7
stress R2A with Vancomycin 0.009 mM N.D. -2.0 N.D. +0.7 +2.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +2.3 N.D. -0.6 -0.7
phage AgroPhage_F10 N.D. +2.4 N.D. -0.6 +0.7
stress R2A with m-arsenite 0.8 mM N.D. +0.3 N.D. +1.9 +1.5
stress R2A with m-arsenite 0.8 mM N.D. -0.2 N.D. +1.9 +2.5
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