Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0684 and Atu0685 are separated by 57 nucleotidesAtu0685 and Atu0686 are separated by 272 nucleotidesAtu0686 and Atu0687 are separated by 151 nucleotidesAtu0687 and Atu0688 are separated by 54 nucleotides Atu0684: Atu0684 - hypothetical protein, at 678,704 to 679,552 Atu0684 Atu0685: Atu0685 - riboflavin biosynthesis bifunctional protein, at 679,610 to 680,590 Atu0685 Atu0686: Atu0686 - isoleucyl-tRNA synthetase, at 680,863 to 683,766 Atu0686 Atu0687: Atu0687 - hypothetical protein, at 683,918 to 684,547 Atu0687 Atu0688: Atu0688 - cytidine and deoxycytidylate deaminase, at 684,602 to 685,060 Atu0688
Group Condition Atu0684 Atu0685 Atu0686 Atu0687 Atu0688
stress R2A with Vancomycin 0.009 mM -0.9 N.D. N.D. -4.8 N.D.
stress Dodecyl Sulfate 0.2 mM +0.1 N.D. N.D. -5.4 N.D.
stress Dodecyl Sulfate 0.2 mM +0.1 N.D. N.D. -5.4 N.D.
nitrogen source D-Alanine (N) +0.2 N.D. N.D. -3.6 N.D.
carbon source L-ascorbate (C) -0.0 N.D. N.D. -3.2 N.D.
stress R2A with Vancomycin 0.009 mM -1.2 N.D. N.D. -2.0 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 N.D. N.D. -3.2 N.D.
stress methyl jasmonate 5 mM -0.1 N.D. N.D. -2.3 N.D.
nitrogen source D-Alanine (N) +0.3 N.D. N.D. -2.5 N.D.
carbon source L-Sorbose (C) -0.8 N.D. N.D. -1.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 N.D. N.D. -1.6 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. N.D. -1.9 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. N.D. -1.6 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.8 N.D. N.D. -1.0 N.D.
stress R2A with Polymyxin B sulfate 0.00075 mM -0.3 N.D. N.D. -1.5 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. N.D. -1.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. N.D. -1.4 N.D.
stress R2A with Ceftazidime 4 mM -0.0 N.D. N.D. -1.7 N.D.
stress R2A with Novobiocin 0.002 mM +0.2 N.D. N.D. -1.8 N.D.
stress R2A with Novobiocin 0.002 mM +0.1 N.D. N.D. -1.7 N.D.
carbon source L-ascorbate (C) +0.3 N.D. N.D. -1.5 N.D.
stress D(+)-Carvone 5 mM +0.4 N.D. N.D. -1.3 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 N.D. N.D. -1.4 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 N.D. N.D. -1.4 N.D.
carbon source D-Arabinose (C) +0.8 N.D. N.D. -1.0 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. N.D. +1.6 N.D.
phage AgroPhage_E04 -0.7 N.D. N.D. +2.1 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 N.D. N.D. +2.3 N.D.
phage AgroPhage_D04 +0.1 N.D. N.D. +1.7 N.D.
phage AgroPhage_F10 -0.5 N.D. N.D. +2.4 N.D.
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