Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu8056 and Atu0682 are separated by 62 nucleotidesAtu0682 and Atu0683 are separated by 75 nucleotidesAtu0683 and Atu0684 are separated by 369 nucleotidesAtu0684 and Atu0685 are separated by 57 nucleotides Atu8056: Atu8056 - hypothetical protein, at 675,933 to 676,265 Atu8056 Atu0682: Atu0682 - GroEL chaperonin, at 676,328 to 677,962 Atu0682 Atu0683: Atu0683 - co-chaperonin GroES, at 678,038 to 678,334 Atu0683 Atu0684: Atu0684 - hypothetical protein, at 678,704 to 679,552 Atu0684 Atu0685: Atu0685 - riboflavin biosynthesis bifunctional protein, at 679,610 to 680,590 Atu0685
Group Condition Atu8056 Atu0682 Atu0683 Atu0684 Atu0685
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.3 N.D. N.D. +0.1 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.6 N.D. N.D. -0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.5 N.D. N.D. -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.6 N.D. N.D. +0.0 N.D.
phage AgroPhage_H04 -2.4 N.D. N.D. -0.1 N.D.
lb_sorghum f72 f505 LB_Sorghum F72 F505 -2.2 N.D. N.D. -0.2 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.0 N.D. N.D. -0.3 N.D.
lb LB -1.7 N.D. N.D. -0.4 N.D.
stress R2A with Vancomycin 0.009 mM -0.9 N.D. N.D. -1.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.7 N.D. N.D. -0.3 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.7 N.D. N.D. -0.3 N.D.
nitrogen source 5-Aminolevulinic (N) -2.1 N.D. N.D. +0.1 N.D.
lb_sorghum_leaf LB_sorghum_leaf -1.3 N.D. N.D. -0.6 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.0 N.D. N.D. +0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.8 N.D. N.D. -0.1 N.D.
nophagecontrol No phage control -1.4 N.D. N.D. -0.5 N.D.
phage AgroPhage_D10 -1.4 N.D. N.D. -0.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.9 N.D. N.D. +0.1 N.D.
lb_sorghum_leaf LB_sorghum_leaf -1.9 N.D. N.D. +0.1 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.8 N.D. N.D. -0.0 N.D.
nitrogen source 4-Aminobutyric (N) -1.8 N.D. N.D. +0.1 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.6 N.D. N.D. +0.4 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.2 N.D. N.D. +0.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.2 N.D. N.D. +0.6 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.4 N.D. N.D. -0.8 N.D.
carbon source D-Saccharic potassium salt (C) +1.3 N.D. N.D. -0.5 N.D.
phage Phage 95.3 + bacteria +1.3 N.D. N.D. -0.4 N.D.
phage phage 95.1 +1.7 N.D. N.D. +0.0 N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.6 N.D. N.D. +0.2 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +3.0 N.D. N.D. -0.5 N.D.
remove
Atu8056
plot		 remove
Atu0682
plot		 remove
Atu0683		 remove
Atu0684
plot		 remove
Atu0685
plot